Part of scaffold_789 (Scaffold)

For more information consult the page for scaffold_789 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPG21 ENSTTRG00000012554 (Bottlenosed dolphin)

Gene Details

spastic paraplegia 21 (autosomal recessive, Mast syndrome)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011910, Bottlenosed dolphin)

Protein Percentage 87.95%
cDNA percentage 87.4%
Ka/Ks Ratio 0.03615 (Ka = 0.0016, Ks = 0.0434)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 927 bp    Location:833223..859232   Strand:+
>bmy_12713
ATGGGAGAGATTAAAGTCTCTCCTGATTATAACTGGTTTAGAAGTACAGTCCCCCTTAAAAAGATTATTGTGGATGATGACGACAGTAAGATCTGGTCGCTCTACGATGCAGGCCCCAGAAATATCAGGTGTCCTCTCATATTTCTCCCTCCCGTCAGCGGAACTGCTGATGTATTTTTCCGGCAGATTTTGGCTTTGACTGGATGGGGTTACCGGGTTATAGCTTTGCAGTATCCAGTTTATTGGGACCATCTTGAATTCTGTGATGGATTCAGGAAACTTTTAGACCATTTACAGTTGGATAAAGTTCATCTCTTTGGGGCTTCTTTGGGAGGCTTTTTGGCCCAGAAGTTTGCTGAATACACTCACAAATCTCCCAGAGTCCATTCTCTCATCCTCTGCAATTCCTTCAGTGACACTTCTATCTTTAACCAAACATGGACTGCAAACAGCTTTTGGCTGATGCCATCATTTATGCTCAAAAAAATAGTTCTTGGAAACTTTTCATCTGGCCCAGTGGACCCTATGATGGCTGATGCCATTGATTTCATGGTGGACAGGCTGGAAAGTTTGGGGCAGAGTGAACTGGCTTCAAGACTTACCCTGAATTGTCAAAATTCTTACGTGGAACCTCATAAAATTCGGGACATCCCTGTAACCATCATGGACGTGTTTGACCAGAGTGCACTTTCAACTGAAGCTAAAGAAGAAATGTACAAACTGTATCCTAATGCCCGGAGGGCTCACCTGAAAACAGGAGGCAATTTCCCATACCTGTGCAGAAGTGCAGAGGTGAATCTCTATGTACAGATACATTTGCTGCAATTCCACGGAACCAAATATGCGGCTATTGACCCATCGATGGTCAGTGCTGAGGAACTCGAGGTGCAGAAAGGCAACCTTGCCATCAGTCAGGAGGAGCAGTAG

Related Sequences

bmy_12713T0 Protein

Length: 309 aa     
>bmy_12713T0
MGEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRNIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIFNQTWTANSFWLMPSFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLLQFHGTKYAAIDPSMVSAEELEVQKGNLAISQEEQ*