Sequence detailsbmy_12713 (Coding sequence)

Part of scaffold_789 (SequenceType object (1))

For more information consult the page for scaffold_789 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPG21ENSTTRG00000012554 (Bottlenosed dolphin)

Gene Details

spastic paraplegia 21 (autosomal recessive, Mast syndrome)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011910, Bottlenosed dolphin)

Protein Percentage 87.95%
cDNA percentage 87.4%
Ka/Ks Ratio 0.03615 (Ka = 0.0016, Ks = 0.0434)

Additional orthologs identified in other species via the OPTIC pipeline.

SPG21 (Cow)   SPG21 (Human)   Spg21 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 927 bp    Location:833223..859232   Strand:+
Raw sequence 
>bmy_12713
ATGGGAGAGATTAAAGTCTCTCCTGATTATAACTGGTTTAGAAGTACAGTCCCCCTTAAAAAGATTATTGTGGATGATGACGACAGTAAGATCTGGTCGCTCTACGATGCAGGCCCCAGAAATATCAGGTGTCCTCTCATATTTCTCCCTCCCGTCAGCGGAACTGCTGATGTATTTTTCCGGCAGATTTTGGCTTTGACTGGATGGGGTTACCGGGTTATAGCTTTGCAGTATCCAGTTTATTGGGACCATCTTGAATTCTGTGATGGATTCAGGAAACTTTTAGACCATTTACAGTTGGATAAAGTTCATCTCTTTGGGGCTTCTTTGGGAGGCTTTTTGGCCCAGAAGTTTGCTGAATACACTCACAAATCTCCCAGAGTCCATTCTCTCATCCTCTGCAATTCCTTCAGTGACACTTCTATCTTTAACCAAACATGGACTGCAAACAGCTTTTGGCTGATGCCATCATTTATGCTCAAAAAAATAGTTCTTGGAAACTTTTCATCTGGCCCAGTGGACCCTATGATGGCTGATGCCATTGATTTCATGGTGGACAGGCTGGAAAGTTTGGGGCAGAGTGAACTGGCTTCAAGACTTACCCTGAATTGTCAAAATTCTTACGTGGAACCTCATAAAATTCGGGACATCCCTGTAACCATCATGGACGTGTTTGACCAGAGTGCACTTTCAACTGAAGCTAAAGAAGAAATGTACAAACTGTATCCTAATGCCCGGAGGGCTCACCTGAAAACAGGAGGCAATTTCCCATACCTGTGCAGAAGTGCAGAGGTGAATCTCTATGTACAGATACATTTGCTGCAATTCCACGGAACCAAATATGCGGCTATTGACCCATCGATGGTCAGTGCTGAGGAACTCGAGGTGCAGAAAGGCAACCTTGCCATCAGTCAGGAGGAGCAGTAG

Related Sequences

bmy_12713T0 SequenceType object (3)

Length: 309 aa      
>bmy_12713T0
MGEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRNIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIFNQTWTANSFWLMPSFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLLQFHGTKYAAIDPSMVSAEELEVQKGNLAISQEEQ*