Sequence detailsbmy_12728 (Coding sequence)

Part of scaffold_769 (SequenceType object (1))

For more information consult the page for scaffold_769 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CACNB1ENSTTRG00000006686 (Bottlenosed dolphin)

Gene Details

calcium channel, voltage-dependent, beta 1 subunit

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006328, Bottlenosed dolphin)

Protein Percentage 97.9%
cDNA percentage 97.46%
Ka/Ks Ratio 0.17928 (Ka = 0.0133, Ks = 0.0743)

BT.37145ENSBTAG00000002036 (Cow)

Gene Details

Voltage-dependent L-type calcium channel subunit beta-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040778, Cow)

Protein Percentage 98.0%
cDNA percentage 96.27%
Ka/Ks Ratio 0.07412 (Ka = 0.0105, Ks = 0.1421)

Additional orthologs identified in other species via the OPTIC pipeline.

CACNB1 (Human)   Cacnb1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1722 bp    Location:269020..251908   Strand:-
Raw sequence 
>bmy_12728
ATGGTCCAGAAGACCAGCATGTCCCGGGGCCCTTACCCATCCTCCCAGGAGATCCCCATGGAGGTCTTCGACCCCAGCCCACAGGGCAAATACAGCAAGAGGAAAGGGCGGTTCAAAAGGTCGGATGGGAGCACATCCTCGGATACAACATCCAACAGCTTTGTCCGCCAGACCAAGCCAGTGGCATTTGCTGTGCGGACAAATGTCGGCTACAACCCATCTCCAGGGGATGAGAAATACAATAATGACTGGTGGATTGGGCGACTGGTGAAGGAGGGCTGTGAGGTTGGCTTCATCCCCAGCCCTGTCAAACTGGACAGCCTGCGCCTGCTGCAGGAACAGAAGCTGCGCCAGAACCGCCTCAGCTCCAGCAAATCAGGTGACAACTCCAGCTCCAGTCTGGGAGACGTGGTGACTGGCACCCGCCGCCCCACGCCCCCTGCCAGTGGTAATGAAATGACTAACTTAGCCTTTGAACTAGACCCCCTAGAGTTAGAGGATGAGGAGGTAGAGCTCGGTGAGCATAGTGCCTCTGCCAAGACTAGCGTTAGCAGTGTCACCACCCCGCCACCCCACGGCAAGCGCATCCCCTTCTTCAAGAAGACAGAGCATGTGCCCCCCTATGACGTGGTACCTTCCATGAGGCCCATCATCCTGGTGGGACCGTCGCTCAAGGGCTATGAGGTTACAGACATGATGCAGAAAGCTTTATTTGACTTCTTGAAGCATCGGTTTGATGGCAGGATCTCCATCACTCGTGTGACAGCGGACATTTCCCTGGCTAAGCGCTCAGTCCTCAACAACCCCAGCAAACACATCATCATCGAGCGTTCAAACACACGCTCCAGCCTGGCTGAGGTTCAGAGCGAGATCGAGCGAATCTTCGAGCTAGCCCGGACCCTTCAGTTGGTTGCTCTGGACGCCGACACCATCAACCACCCAGCCCAGCTCTCCAAGACCTCACTGGCCCCCATCATTGTTCTTCAGAGGCTCATCAAGTCTCGAGGGAAGTCTCAGTCCAAACACCTCAATGTGCAAATAGCAGCCTCGGAGAAGCTCGCGCAGTGTCCCCCCGAAATGTTTGACATCATCCTGGATGAGAATCAATTGGAGGATGCCTGCGAGCATTTGGCCGAGTACTTGGAAGCCTATTGGAAGGCCACACACCCGCCCAGCAGCACTCCGCCCAATCCGCTGCTGAACCGCACCATTGCTACTGCAGCGCTTGCTGCCAGCCCTGCCCCTGTCTCCAACCTCCAGGGACCATACCTTGCTTCCGGGGACCAGTCGCTGGAACGGGCCACCGGGGAGCACGCCAGCGTGCACGAGTACCCGGGAGAGCTGGGCCAGCCCCCAGGCCTTTACCCCAGCAGCCAGCCGCCAGGCCGGGCGGGCACCCTGCGGGCACTGTCCCGCCAAGACACGTTTGATGCCGACACCCCTGGCAACCGAAACTCTGCCTACACGGAGCTGGGAGACTCGTGTGTGGACATGGAGACTGACCCCTCCGAGGGGCCAGGGCTTGGAGACCCTGCAGGGGGCAGCACCCCACCAGCCCGACAGGGATCCTGGGAGGATGAGGAAGACTATGAAGAGGAGCTGACCAACAACCGGAACCGCGGCCGGAATAAGGCGCGCTATTGCGCAGAGGGCGGGGGTCCAGTTCTGGGGCGCAACAAGAATGAGCTGCAGGGCTGGGGGCGGGGTGTCTACATCCGCTGA

Related Sequences

bmy_12728T0 SequenceType object (3)

Length: 574 aa      View alignments
>bmy_12728T0
MVQKTSMSRGPYPSSQEIPMEVFDPSPQGKYSKRKGRFKRSDGSTSSDTTSNSFVRQTKPVAFAVRTNVGYNPSPGDEKYNNDWWIGRLVKEGCEVGFIPSPVKLDSLRLLQEQKLRQNRLSSSKSGDNSSSSLGDVVTGTRRPTPPASGNEMTNLAFELDPLELEDEEVELGEHSASAKTSVSSVTTPPPHGKRIPFFKKTEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKHIIIERSNTRSSLAEVQSEIERIFELARTLQLVALDADTINHPAQLSKTSLAPIIVLQRLIKSRGKSQSKHLNVQIAASEKLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKATHPPSSTPPNPLLNRTIATAALAASPAPVSNLQGPYLASGDQSLERATGEHASVHEYPGELGQPPGLYPSSQPPGRAGTLRALSRQDTFDADTPGNRNSAYTELGDSCVDMETDPSEGPGLGDPAGGSTPPARQGSWEDEEDYEEELTNNRNRGRNKARYCAEGGGPVLGRNKNELQGWGRGVYIR*