Sequence detailsbmy_12734 (Coding sequence)

Part of scaffold_769 (SequenceType object (1))

For more information consult the page for scaffold_769 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MED1ENSTTRG00000008439 (Bottlenosed dolphin)

Gene Details

mediator complex subunit 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008003, Bottlenosed dolphin)

Protein Percentage 97.04%
cDNA percentage 98.16%
Ka/Ks Ratio 0.53938 (Ka = 0.0154, Ks = 0.0286)

MED1ENSBTAG00000013236 (Cow)

Gene Details

mediator of RNA polymerase II transcription subunit 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053186, Cow)

Protein Percentage 99.16%
cDNA percentage 98.39%
Ka/Ks Ratio 0.08252 (Ka = 0.004, Ks = 0.0485)

MED1 (Minke Whale)

Gene Details

mediator complex subunit 1

External Links

Gene match (Identifier: BACU007007, Minke Whale)

Protein Percentage 99.81%
cDNA percentage 99.65%
Ka/Ks Ratio 0.08511 (Ka = 0.0009, Ks = 0.0105)

Additional orthologs identified in other species via the OPTIC pipeline.

MED1 (Human)   Med1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3234 bp    Location:461231..435603   Strand:-
Raw sequence 
>bmy_12734
ATGTCCATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAGGCCGACACTCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAAAAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACACCTTTCCGGGGGGTCCCATTACCACCTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGAGGACTTCAGCAAGGTATCTCAGAACCCAATTCTTACCAGTTTGTTGCAAATCACAGGGAACGGGGGGTCTACCATTGGCTCGAGTCCGACCCCTCCTCATCACACGCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCTGCCCAGGATTTCTCAACCCTTTATGGAAGCAGCCCTTTAGAAAGGCAGAACTCCTCTTCCGGCTCACCCCGGATGGAAATGTGCTCGGGAAGCAACAAGGCAAAGAAGAAGAAATCATCAAGATTACCACCTGATAAACCCAAGCACCAGACTGAAGATGACTTTCAGAGGGAGCTATTTTCAATGGATGTTGACTCACAGAACCCTATCTTTGATGTCAACATGACAGCTGACACGCTGGATACGCCACACATCACTCCAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTTACCCACAACCAGTACCTCATCCCCAATCCAGTATTCAAAGGATGGTCCGACTATCCAGTTCAGACAGCATTGGCCCGGATGTAACTGATATCCTTTCAGACATTGCAGAAGAAGCTTCTAAGCTTCCCAGCACTAGTGACGATTGTCCACCCATTGGCACCCCTGTTCGAGATTCTTCAAGCTCTGGGCATTCTCAGAGTGCCCTCTTTGACCCTGATGTCTTTCAAGCCAATAATAATGAAAATCCATACACTGATCCAGCTGACCTTATTGCAGATGCTGCTGGAAGCCCCAGTAGTGACTCTCCTACCAATCATTTTTTTCCTGATGGAGTAGATTTCAATCCTGATTTGTTGAACAGCCAGAGCCAAAGTGGTTTTGGAGAAGAATATTTTGATGAAAGCAGCCAAAGTGGAGATAATGATGATTTCAAAGGATTTACATCTCAGGCACTAAATACTTTGGGGGTGCCAATGCTTGGAGGTGATAATGGGGAGACTAAGTTTAAAGGCAATAGCCAAGCTGACACAGTTGATTTCAGTATAATAGCAGTGGCTGGTAAGGCTTTGGGTCCTACAGATCTTATGGAGCATCACAGTGGTAGCCAGAGTCCTTTATTGACCACTGGGGACTTAGGGAAAGAAAAGACTCAAAAGAGAGTAAAGGAAGGCAATGGCACCAGTAACAGTAGTCTATCAGGGCCAGGATTAGACAGCAAACCAGGGAAGCGCAGTCGAACCCCTTCTAATGATGGCAAAAGCAAAGATAAGCCTCCAAAACGGAAGAAGGCAGACACTGAGGGAAAGTCTCCATCTCACAGTTCTTCTAACCGACCTTTCACCCCACCTACTAGTACAGGTGGATCCAAATCTCCAGGCAGTTCAGGAAGATCTCAGACTCCCCCAGGTGTTGCCACACCACCCATTCCCAAAATCACTATTCAGATTCCTAAGGGAACTGTGATGGTGGGCAAGCCCTCCTCTCACAGTCAGTATACCAGCAGTGGTTCTGTGTCTTCCTCAGGAAGTAAAAGCCACCATAGCCATTCTTCCTCGTCTTCTGCTTCCAACTCAGGCAAGATGAAAAGCAGTAAATCAGAAGGTTCATCAAGTTCCAAGTTAAGTAGCAGTATATATTCTAGCCAGGGGTCTTCGGGATCTAGCCAGTCCAAAAATTCATCCCAGTCTGGGGGGAAGCCTGGCTCCTCTCCTATTACCAAGCATGGACTGAGCAGTGGCTCCAGCAGCACCAAGATGAAACCTCAAGGGAAGCCATCATCACTTATGAATCCTTCTTTGAGTAAACCAAACATATCCCCTTCCCATTCAAGGCCACCTGGAGGCTCTGATAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGGACTCCCCCATCCTCTAAAGCCAAGTCTCCTATCAGTTCAGGTTCTGGTGGTTCTCACATGTCTGGAACTAGTTCAAGCACTGGCATGAAGTCATCTTCAGGGTTAGGATCTTCAGGCTCATTGTCTCAGAAAACTCCCCCATCATCTAACTCTTGTACAGCATCTTCCTCTTCCTTTTCCTCAAGTGGCTCTTCCATGTCATCCTCTCAGAACCAGCATGGGAGTTCCAAAGGGAAATCTCCCAGCAGAAATAAGAAGCCGTCCTTAACAGCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCAATGGACGGCCAAATGGGGGTGAGCACAAATTCTAGCCATCCTGTGTCCTCCAAACATAACATGTCAGGAGGAGAGTTCCAGGGCAAGCGTGAGAAAAGTGATAAAGACAAATCAAAGGTTTCCACCTTGGGGGGCTCGGTGGATTCATCTAAGAAGACCTCAGAGTCAAAAAATGTGGGGAGCACGGGTGTGGCAAAAATTATCATCAGCAAGCATGATGGGGGATCCCCCAGCATTAAAGCCAAAGTGACTTTGCAGAAACCTGGGGAAAGTAGTGGAGAAGGGCTGAGGCCTCAGATGGCCTCTTCCAAAAACTATGGCTCTCCACTCATCAGTGGTTCCACTCCAAAGCATGAGCGTGGCTCTCCCAGTCATAGTAAGTCACCAGCATATACCCCCCAGAATCTGGACAGTGAGAGTGAGTCAGGCTCCTCCATAGCAGAGAAGTCTTACCAGAACAGTCCCAGCTCAGATGATGGCATCCGACCTCTTCCAGAGTACAGCACAGAGAAGCATAAGAAGCACAAAAAAGAAAAGAAGAAAGTAAAAGACAAAGATAGGGACCGGGACCGGGACAAAGACCGAGACAAGAAAAAATCTCATAGCATCAAGCCAGAGAGTTGGTCTAAATCACCCATCTCTTCAGACCAGTCCTTGTCTATGACAAGTAACACAATCTTATCTACAGACAGGCCCTCAAGGCTCAGCCCTGACTTTATGATTGGGGAGGAAGATGACGATCTTATGGATGTGGCCCTGATTGGCAACTAG

Related Sequences

bmy_12734T0 SequenceType object (3)

Length: 1078 aa      View alignments
>bmy_12734T0
MSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKNLPPASSPGYGMTTGNNPMSGTTTPTNTFPGGPITTLFNMSMSIKDRHESVGHGEDFSKVSQNPILTSLLQITGNGGSTIGSSPTPPHHTPPPVSSMAGNTKNHPMLMNLLKDNPAQDFSTLYGSSPLERQNSSSGSPRMEMCSGSNKAKKKKSSRLPPDKPKHQTEDDFQRELFSMDVDSQNPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQPVPHPQSSIQRMVRLSSSDSIGPDVTDILSDIAEEASKLPSTSDDCPPIGTPVRDSSSSGHSQSALFDPDVFQANNNENPYTDPADLIADAAGSPSSDSPTNHFFPDGVDFNPDLLNSQSQSGFGEEYFDESSQSGDNDDFKGFTSQALNTLGVPMLGGDNGETKFKGNSQADTVDFSIIAVAGKALGPTDLMEHHSGSQSPLLTTGDLGKEKTQKRVKEGNGTSNSSLSGPGLDSKPGKRSRTPSNDGKSKDKPPKRKKADTEGKSPSHSSSNRPFTPPTSTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVMVGKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSASNSGKMKSSKSEGSSSSKLSSSIYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSTGMKSSSGLGSSGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPGGEDPMDGQMGVSTNSSHPVSSKHNMSGGEFQGKREKSDKDKSKVSTLGGSVDSSKKTSESKNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGESSGEGLRPQMASSKNYGSPLISGSTPKHERGSPSHSKSPAYTPQNLDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSTEKHKKHKKEKKKVKDKDRDRDRDKDRDKKKSHSIKPESWSKSPISSDQSLSMTSNTILSTDRPSRLSPDFMIGEEDDDLMDVALIGN*