Sequence detailsbmy_12763 (Coding sequence)

Part of scaffold_771 (SequenceType object (1))

For more information consult the page for scaffold_771 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMAGPENSTTRG00000013846 (Bottlenosed dolphin)

Gene Details

small cell adhesion glycoprotein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013130, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 100.0%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0125)

SMAGPENSBTAG00000001983 (Cow)

Gene Details

Small cell adhesion glycoprotein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002572, Cow)

Protein Percentage 90.63%
cDNA percentage 91.67%
Ka/Ks Ratio 0.19335 (Ka = 0.0457, Ks = 0.2361)

SMAGP (Minke Whale)

Gene Details

small cell adhesion glycoprotein

External Links

Gene match (Identifier: BACU008034, Minke Whale)

Protein Percentage 97.56%
cDNA percentage 99.19%
Ka/Ks Ratio 99.0 (Ka = 0.0109, Ks = 0.0001)

Additional orthologs identified in other species via the OPTIC pipeline.

SMAGP (Human)   Smagp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 291 bp    Location:238451..238161   Strand:-
Raw sequence 
>bmy_12763
ATGACTAGCCTCCCAACCACGCCTTCTCCAGGAGAAGAACTGATGGCCACCCCAATCCTACAGGCCACTGAGGCCCTGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTTATCACAGTGGTCTTCCTCACCCTGCTCTCAGTCGTGATCTTGATCTTCTTTTACCTGTACAAGAACAAAGGCAGCTACGTCACCTACGAACCTGCAGAAGGCGAGCCCGGCGCCGTCCTCCAGATGGAGAGCAACTCAGCCAAGGGCAGGGAGGAGGAATATTTCATCTAA

Related Sequences

bmy_12763T0 SequenceType object (3)

Length: 97 aa      View alignments
>bmy_12763T0
MTSLPTTPSPGEELMATPILQATEALSPEAEASTALIAVVITVVFLTLLSVVILIFFYLYKNKGSYVTYEPAEGEPGAVLQMESNSAKGREEEYFI*