Part of scaffold_771 (Scaffold)

For more information consult the page for scaffold_771 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFRSF1B ENSTTRG00000004614 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor receptor superfamily, member 1B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004349, Bottlenosed dolphin)

Protein Percentage 81.98%
cDNA percentage 84.42%
Ka/Ks Ratio 0.41745 (Ka = 0.0381, Ks = 0.0912)

TNFRSF1B ENSBTAG00000024928 (Cow)

Gene Details

tumor necrosis factor receptor superfamily member 1B precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034614, Cow)

Protein Percentage 77.95%
cDNA percentage 82.8%
Ka/Ks Ratio 0.37897 (Ka = 0.1502, Ks = 0.3963)

TNFRSF1B  (Minke Whale)

Gene Details

tumor necrosis factor receptor superfamily, member 1B

External Links

Gene match (Identifier: BACU002967, Minke Whale)

Protein Percentage 91.14%
cDNA percentage 94.47%
Ka/Ks Ratio 0.55127 (Ka = 0.0493, Ks = 0.0894)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1326 bp    Location:527165..511148   Strand:-
>bmy_12766
ATGTCAGTAGAGCCCCAGCAGGGAGAAGGCCAAACACTTGCAGGACACAAGATGGGGATCTGGGCGTACAGCGCTGTGTTTGTCCCCTATGTCCCGGAGCCCGGAAGCTCGTGCCGGCTGCAAGAATACTACGACACAAAGGTCCAGATGTGCTGCAGCAAGTGTCCACCAGGCTACCACGTACATTCCTTATGCAACAAGACCTCAGACACCGTGTGTGACTCCTGCGAGAGCAGCACATACACCCAGCTCTGGAACTTGGTCCCCGCGTGCTTTAGCTGTAACTCCCGGTGCAGCTCTGACCAGTCGGAAACTCAAGCCTGCACAACAAAACAGAACCGCATCTGCACCTGCAAGCCGGGCTGGTACTGCACCCTGGGAAGACAGGAGGGGTGCCGGCTGTGCGTGCCACTGCGCAAATGCGGCCCTGGCTTCGGCGTGGCCAAACCGGGAACTGCAACATCAAATGTGGCGTGTGCTCCCTGTGCCCCAGGGACGTTCTCCGACACAACATCATCCACGGACACTTGCAGGCCCCACCGGATCTGTAGCTCGGTGGCCGTCCGTGGCACCTCAGAGATGGATGCAGTCTGCACATCTGTGCTCCCCACCCTGAAAGGCACCCCGGGCCTAGCCCTCACAAGATCCCAACACATGGAGCCGACTCCAGGGCCCAGCACAGCTCCAAGCACCTCCGTCCGGCTCACGATGGTCCCAGGTCCTCCAAGTTACCCAGTTGAAGGGCGCAACACAGCAAACATCTCTTTTCCCATTGGACTGATTGTAGGTGTGACAGCGTTGGAGAAGCCCTTCTGCCTGCACGGAGACGCCAAGGTGCCGCATCTGCCAGCTGACAAGGCTCGAAGTGCCCCAGGCCCCGAGCAGCAGCTCCTGCTGACCACGGCGCCAAGCTCCAGCAGCAGTTCCCTGGAGAGCTCGGCCAGCGCCACGGACAGGAGGGCGCCCTCCAGGCCCCAGCTGCAGGCGCCGGGCGTGGAGAAGGCCGGCGGGTCTGGGGAGGCCCCGGCCAGCTGCGGCAGCTCAGCAGAGGCATCATCTGGCGGCCACGGGACCCAGGTCAATGTCACCTGCATCGTCAACGTTTGCAGCAGCTCTGACCACAGCTCTCGATGCCCCTCCCAGGCCAACTCCACGAGGGACACAGACACCAGCCCCTCTGGCTCCCCGAAAGATGAGCAGGTCCCCTTCTCCAAGGAGGAATGCCCTTTCCAGTCCCAGCCGGGGGCTCCAGAGACTCTGCTGCAGAGCCCAGAGGAGAAGCCCCTGCCCCTCGGTGTGCCTGATGCCGGCATGAAGCCCAGCTAA

Related Sequences

bmy_12766T0 Protein

Length: 442 aa      View alignments
>bmy_12766T0
MSVEPQQGEGQTLAGHKMGIWAYSAVFVPYVPEPGSSCRLQEYYDTKVQMCCSKCPPGYHVHSLCNKTSDTVCDSCESSTYTQLWNLVPACFSCNSRCSSDQSETQACTTKQNRICTCKPGWYCTLGRQEGCRLCVPLRKCGPGFGVAKPGTATSNVACAPCAPGTFSDTTSSTDTCRPHRICSSVAVRGTSEMDAVCTSVLPTLKGTPGLALTRSQHMEPTPGPSTAPSTSVRLTMVPGPPSYPVEGRNTANISFPIGLIVGVTALEKPFCLHGDAKVPHLPADKARSAPGPEQQLLLTTAPSSSSSSLESSASATDRRAPSRPQLQAPGVEKAGGSGEAPASCGSSAEASSGGHGTQVNVTCIVNVCSSSDHSSRCPSQANSTRDTDTSPSGSPKDEQVPFSKEECPFQSQPGAPETLLQSPEEKPLPLGVPDAGMKPS*