Part of scaffold_771 (Scaffold)

For more information consult the page for scaffold_771 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLOD1 ENSTTRG00000003503 (Bottlenosed dolphin)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003286, Bottlenosed dolphin)

Protein Percentage 97.94%
cDNA percentage 97.85%
Ka/Ks Ratio 0.1159 (Ka = 0.009, Ks = 0.0773)

PLOD1 ENSBTAG00000002052 (Cow)

Gene Details

Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002658, Cow)

Protein Percentage 89.93%
cDNA percentage 88.92%
Ka/Ks Ratio 0.12332 (Ka = 0.0605, Ks = 0.4904)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2343 bp    Location:736686..709014   Strand:-
>bmy_12770
CGGGCGAGTCTGCAGGAAACCCTTCCCCCCGGCAGCGCGGCGCGACACCGCCCCCGGGGCGGGCCCAGTGCGTGGCAGCGGGATCAGCGGCCCCGTCGGGAAGTTTCCAGTCTGCGAGCGAGCGCCGCTGGACACGCCGGACGTTCCCAGACCCGGACCATGCGGCTCCAGTTGCTCCTGGCCCCGCTGGGCTGGCTGCTGCTGGTCGAAACGAAGGGTGATGCCAAGCCGGAGGACAACCTTTTGGTCCTCACGGTGGCCACAGAGGAGACTGAGGGGTTCCGACGCTTCAAGCGCTCAGCCCAGTTCTTCAACTACAAGATCCAGGCGCTGGGGCTGGGGGAGGACTGGCATGGGGAGAAGGAGATGTCGGCAGGTGGAGGGCTGAAGGTTCGACTACTGAAGAAAGCCCTGGAGAAGCACGCAGACAAGGAGAACCTGGTCATTCTCTTCACAGACAGCTACGACGTGCTGTTTGCCTCCGGGCCCCGAGAGCTCCTGAAGAAGTTCCGGCAGGCCAGGAGCCAGGTGGTCTTCTCTGCCGAGGAGCTCATCTACCCAGACCGCAGGCTGGAGGCCAAGTACCCGGTGGTATCTGACGGCAAGAGGTTCCTGGGCTCTGGAGGCTTTATCGGTTATGCCCCCAACCTCAGCAAACTGGTGGCCGAGTGGGAGGGTCAAGACAGTGACAGTGACCAGCTCTTTTACACCAAGATCTTCTTGGACCCGGAGAAGAGGGAGGGGATCAATATCACCCTGGACCACCGTTGCCGTATCTTCCAGAATCTGGATGGAGCCTTGGATGAGGTGGTGCTCAAGTTTGAAATGGGCCAAGTGAGAGCAAGGAACCTGGCTTACGACACCCTCCCAGTCCTGATTCATGGCAATGGGCCTACCAAGCTGCAGCTGAACTACCTGGGCAACTACATCCCACGCTTCTGGACCTTTGAGACGGGATGTGCTGTGTGTGATGAGGGCCTGCACAGCCTCAAGGGCATCGGGGATGAAGCTCTGCCCACGGTCCTGGTTGGCGTGTTCATCGAACAGCCCACGCCGTTCCTGTCCCTGTTCTTCCAGCGGCTCCTGCGCCTCCATTACCCCCGGAAACGGCTGCGGCTTTTCATTCACAGCCATGAGCAGCAACATGAGACTCAGGTGGAGCAGTTCCTGGCAGAGCATGGCAGCGAGTACCAGTCTGTGAAACTGCTGGGCCCCGAGGTGCGGGTGGCGAACGCGGACGCCAGGAACATGGGCGTGGACTTGTGCCGGCAGGACCGTGGCTGCACCTACTACTTCAGCGTGGATGCCGATGTGGCCCTGACCGAGCCCCAAACCCTGCAGCTGCTAATTGAGCAGAACAAGAATGTCATCGCCCCGTTGATGACCCGCCACGGGAGGCTGTGGTCGAACTTCTGGGGGACACTGAGTGCAGATGGCTACTACGCCCGCTCCGAGGACTACGTGGACATTGTGCAGGGGCGGCGTGTCGGTGTCTGGAACGTGCCCTACATCTCAAACATCTACCTGATCAAGGGCAGTGCCCTGCGGGCTGAGCTGCAGGAGATGGACCTATTCCACCACAGCAAGCTGGACCCGGACATGGCCTTCTGTGCCAACATCCGGCAGCAGGATGTGTTCCTGTTCCTGACCAACCGGCACACCTTCGGCCACCTGCTGTCCCTGGACAGCTACCAAACCACCCACCTCCATAACGACCTCTGGGAGGTGTTCAGCAACCCCGAGGACTGGAAGGAGAAGTACATCCACGAGAACTACACCAAGGCCCTGGCGGGGAAGATGGTGGAGATGCCTTGCCCAGACGTCTACTGGTTCCCCATCTTCACGGAGACGGCCTGTGATGAGCTGGTGGAGGAGATGGAGCACTACGGCCGGTGGTCTCTGGGAGATAACAGGGACAACCGCATCCAGGGTGGCTACGAAAACGTGCCGACCATAGACATCCACATGAACCAGATCAATTTTGAGCGGGAGTGGCACAAGTTCCTGGTGGAGTACATCGCCCCCATGACGGAGAAACTCTACCCGGGCTACTACACCAGGGCCCAGTTCGACCTGGCCTTTGTTGTCCGCTACAAGCCTGACGAGCAACCCTCGCTGATGCCACACCATGACGCCTCCACCTTCACCATTAACATTGCCCTGAACCGGGTTGGGGTGGATTACGAGGGCGGGGGCTGTCGGTTCCTGCGCTACAACTGCTCCGTCCGAGCCCCACGGAAGGGCTGGACTCTCATGCACCCCGGGCGACTCACGCACTACCACGAGGGGCTCCCCACCACCAAAGGCACCCGCTACATCGCAGTCTCCTTCGTCGATCCCTAA

Related Sequences

bmy_12770T0 Protein

Length: 781 aa      View alignments
>bmy_12770T0
RASLQETLPPGSAARHRPRGGPSAWQRDQRPRREVSSLRASAAGHAGRSQTRTMRLQLLLAPLGWLLLVETKGDAKPEDNLLVLTVATEETEGFRRFKRSAQFFNYKIQALGLGEDWHGEKEMSAGGGLKVRLLKKALEKHADKENLVILFTDSYDVLFASGPRELLKKFRQARSQVVFSAEELIYPDRRLEAKYPVVSDGKRFLGSGGFIGYAPNLSKLVAEWEGQDSDSDQLFYTKIFLDPEKREGINITLDHRCRIFQNLDGALDEVVLKFEMGQVRARNLAYDTLPVLIHGNGPTKLQLNYLGNYIPRFWTFETGCAVCDEGLHSLKGIGDEALPTVLVGVFIEQPTPFLSLFFQRLLRLHYPRKRLRLFIHSHEQQHETQVEQFLAEHGSEYQSVKLLGPEVRVANADARNMGVDLCRQDRGCTYYFSVDADVALTEPQTLQLLIEQNKNVIAPLMTRHGRLWSNFWGTLSADGYYARSEDYVDIVQGRRVGVWNVPYISNIYLIKGSALRAELQEMDLFHHSKLDPDMAFCANIRQQDVFLFLTNRHTFGHLLSLDSYQTTHLHNDLWEVFSNPEDWKEKYIHENYTKALAGKMVEMPCPDVYWFPIFTETACDELVEEMEHYGRWSLGDNRDNRIQGGYENVPTIDIHMNQINFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDLAFVVRYKPDEQPSLMPHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSVRAPRKGWTLMHPGRLTHYHEGLPTTKGTRYIAVSFVDP*