Part of scaffold_771 (Scaffold)

For more information consult the page for scaffold_771 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLCN6 ENSTTRG00000011473 (Bottlenosed dolphin)

Gene Details

chloride channel, voltage-sensitive 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010890, Bottlenosed dolphin)

Protein Percentage 88.78%
cDNA percentage 89.98%
Ka/Ks Ratio 0.33752 (Ka = 0.0777, Ks = 0.2302)

CLCN6 ENSBTAG00000020700 (Cow)

Gene Details

chloride transport protein 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027587, Cow)

Protein Percentage 95.51%
cDNA percentage 92.35%
Ka/Ks Ratio 0.07705 (Ka = 0.0232, Ks = 0.3013)

CLCN6  (Minke Whale)

Gene Details

chloride channel, voltage-sensitive 6

External Links

Gene match (Identifier: BACU002973, Minke Whale)

Protein Percentage 90.36%
cDNA percentage 91.88%
Ka/Ks Ratio 0.38187 (Ka = 0.0652, Ks = 0.1708)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2736 bp    Location:851812..825253   Strand:-
>bmy_12773
ATGTCTGTAGCGGTGGAGGAGTGCAGCCAGAAAGGCTGCCTCGCCCTGTCGCTCCTTGAACTCTTGGGTTTCAACTTGACTTTTGTCTTCTTCGCGAGCCTTCTTGTCCTAATTGAGCCAGTGGCAGCGGGTTCTGGGATACCCGAGATCAAATGCTATCTGAATGGTGTGAAGGTGCCCGGAATCGTGCGTCTCCGGACCCTGCTCTGCAAAGTCTTTGGAGTGCTGTTCAGTGTGGCTGGAGGGCTCTTTGTGGGGAAGGAAGGCCCCATGATCCACAGTGGAGCAGTGGTAGGGGCTGGCCTCCCGCAGTTTCAGAGCATCTCTTTACGGAAGATCCAGTTTAACTTCCCCTATTTCCGAAGTGACAGAGACAAGCGGGATTTTGTATCAGCAGGGGCGGCCGCCGGAGTCGCTGCAGCTTTTGGGGCCCCCATTGGGGGTACCTTGTTCAGTCTGGAGGAGGGCTCATCCTTCTGGAACCAAGGGCTTACGTGGAAAGTGCTCTTTTGCTCCATGTCTGCCACCTTCACCCTCAACTTCTTCCGTTCTGGGATTCAGTTTGGAAGTTGGGGTTCCTTCCAGCTCCCTGGATTGCTGAACTTTGGCGAGTTTAAGTGCTCTGACTCTGATAAAAAATGTCATCTCTGGACAGCTATGGACTTGGGTTTCTTCGTCGTGATGGGGGTCGTTGGGGGCCTCCTGGGAGCCACATTCAACTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGAAACGTGCACCCGAAACCTAAGCTCGTCAGAGTCTTGGAGAGCCTCTTGGTGTCTGTGGTGACCACCGTGGTGGTGTTTGTGGCCTCCATGGTGTTAGGAGAATGCCGACAGATGTCTTCCGCAAGTCAAGTCGGCAATGACTCCTTCCCACTCCCACTCCAGGTCACGTCAGAAGAAGTGAATTCCAGCATCAAGACCTTTTTTTGTCCCAATGAGACCTACAATGACATGGCCACACTCTTTTTCAACCCGCAGGAGTCTGGCATCCTTCAGCTTTTCCACCAGGATAGTACTTTTAGCCCCATCACTTTGGCGTTGTTCTTCGTCCTCTATTTCATGCTTGCGTGTTGGACTTACGGCATTTCTGTTCCAAGTGGCCTTTTTGTGCCTTCCCTGCTATGTGGAGCTGCTTTTGGACGTTTAGTTGCCAACGTTCTCAAAAGCTACATTGGATTGGACCATATCTATTCGGGAACCTTTGCCCTGATTGGTGCTGCGGCTTTCTTGGGTGGGGTTGTCCGTATGACCATCAGTCTCACGGTCATCCTGATTGAGTCTACCAACGAGATCAGTTATGGCCTCCCCATTATGATCACCCTGATGGTAGCCAAATGGACAGGGGACTTTTTCAATAAGGGCATTTATGACATCCACGTGGGCCTGCGAGGCGTGCCGCTTCTAGAATGGGAGACGGAGGTGGAAATGGACAAACTGCGAGCCAACGACATCATGGAGCCCAACCTGACCTACGTCTACCCGCACACCCGCATCCAGTCTCTGGTCAGCATCCTGCGCACCACCGTCCACCACGCCTTCCCCGTGGTCACGGAGAACCGGGGCAACGAGAAGGAGTTCATGAAGGGCAATCAGCTCATCAGCAACAACATCAAATACAAGAAGTGCAGCATCCTCACCCGCGCCGGTGAGCAGCGCAGACGGAGCCAGTCCATGAAGTCCTACCCGTCCAGCGAGCTGCGGAACGTGTGCGACGAGCACGTGACCTCCGAGGAYCCGGGCGAGAAGGAGGACCTCCTGCAGCAGATGCTCGAGCGGAGATACACTCCCTACCCCAACCTATACCCTGACCAGTCCCCGAGCGAAGACTGGACCATGGAGGAGCGCTTCCGCCCACTGACCTTCCACGGCCTGATCCTGCGCTCACAACTCGTCACCCTGCTCGTCCGAGGAGTTTGTTATTCTGAAAGCCAGTCGAGCGCCAGCCAGCCGCGCCTCTCCTACGCTGAGATGGCCGAGGATTACCCGCGGTACCCTGACATCCACGACCTGGACCTGACCCTGCTGAACCCGCGCATGATCGTGGACGTCACCCCGTACATGAACCCTGCGCCCTTCACTGTTTCCCCCAACACCCACGTCTCCCAAGTTTTCAACCTGTTCAGAACGATGGGCCTGCGGCACTTGCCCGTGGTGAACGCGGTGGGAGAGATCGTTGGGGTCATCACACGGCACAACCTGACACACGAGCACGGCTGCGGCAGCACTACCAGAGCCTATGACGGCCTGGCTCGGCCTCGCCGCCACGTGCCAGCCCGTCCTCTCCGGGAGCCGCAGCTCGGGCTCCGCCGCCATGGCTGGCCAGGGCTGTTCCTGGGCACGGAAGATGCCCAGTCGCCCGCGCGCTTGGAAAGCCTACAATCATCGAACGCTTTGCCGTCAGAGCTCCTGGGGGTAGTGTCAAGCCATCAGAGTCTGGACTTGTGTGAGCTCTCCGCCAGTGTCTTCCCGTTTCCTGCCCCCTGCGCTCCCCCGTCCAGTGCTGGCACAGGCCCCAGCCCCTCCTCCCCGCTAACACCAGGACCGGAGGGGAAGTCAGGCCTCACCCACTGGCGGGGGCACTCGGAGCAGGTCCCCCACCACCTCTTTGCTCCTTTCCTAGGGAACCCAGCTGTTGCCTTAAACCATCATGGGAGGGACCTTGACCGAGGCAAACACTGGGTGGAATGCCAGTTGCAGAATTGA

Related Sequences

bmy_12773T0 Protein

Length: 912 aa      View alignments
>bmy_12773T0
MSVAVEECSQKGCLALSLLELLGFNLTFVFFASLLVLIEPVAAGSGIPEIKCYLNGVKVPGIVRLRTLLCKVFGVLFSVAGGLFVGKEGPMIHSGAVVGAGLPQFQSISLRKIQFNFPYFRSDRDKRDFVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQGLTWKVLFCSMSATFTLNFFRSGIQFGSWGSFQLPGLLNFGEFKCSDSDKKCHLWTAMDLGFFVVMGVVGGLLGATFNCLNKRLAKYRMRNVHPKPKLVRVLESLLVSVVTTVVVFVASMVLGECRQMSSASQVGNDSFPLPLQVTSEEVNSSIKTFFCPNETYNDMATLFFNPQESGILQLFHQDSTFSPITLALFFVLYFMLACWTYGISVPSGLFVPSLLCGAAFGRLVANVLKSYIGLDHIYSGTFALIGAAAFLGGVVRMTISLTVILIESTNEISYGLPIMITLMVAKWTGDFFNKGIYDIHVGLRGVPLLEWETEVEMDKLRANDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPVVTENRGNEKEFMKGNQLISNNIKYKKCSILTRAGEQRRRSQSMKSYPSSELRNVCDEHVTSEDPGEKEDLLQQMLERRYTPYPNLYPDQSPSEDWTMEERFRPLTFHGLILRSQLVTLLVRGVCYSESQSSASQPRLSYAEMAEDYPRYPDIHDLDLTLLNPRMIVDVTPYMNPAPFTVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVGVITRHNLTHEHGCGSTTRAYDGLARPRRHVPARPLREPQLGLRRHGWPGLFLGTEDAQSPARLESLQSSNALPSELLGVVSSHQSLDLCELSASVFPFPAPCAPPSSAGTGPSPSSPLTPGPEGKSGLTHWRGHSEQVPHHLFAPFLGNPAVALNHHGRDLDRGKHWVECQLQN*