Part of scaffold_782 (Scaffold)

For more information consult the page for scaffold_782 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNTN6 ENSTTRG00000015200 (Bottlenosed dolphin)

Gene Details

contactin 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014412, Bottlenosed dolphin)

Protein Percentage 89.78%
cDNA percentage 90.33%
Ka/Ks Ratio 0.41671 (Ka = 0.0185, Ks = 0.0443)

CNTN6 ENSBTAG00000003592 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004672, Cow)

Protein Percentage 90.2%
cDNA percentage 90.89%
Ka/Ks Ratio 0.2507 (Ka = 0.0576, Ks = 0.2298)

CNTN6  (Minke Whale)

Gene Details

contactin 6

External Links

Gene match (Identifier: BACU015131, Minke Whale)

Protein Percentage 98.43%
cDNA percentage 98.72%
Ka/Ks Ratio 0.29066 (Ka = 0.0074, Ks = 0.0256)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3177 bp    Location:344590..578430   Strand:+
>bmy_12792
ATGGGAGAAATTTTGACCTCAGCAAATGGAAATGAGGTTGCTTTGGAAATTGGTAATTCTGCTGACACTCATAAATGCTTATGCAGAAGAGGAGCACCTCTTGGAATCAAAGCCCTAATTCTGTTTCTGGCTTCAAAGAGAACAGGTGATGGTCGTTTGAGCCGTCCTATTTTTACCCAGGAACCACAAGATGTTATTTTTCCATTGGATTTGTCAAAATCTGAAATCATCCTGGATTGTGCTGCTAATGGTTACCCTTCACCCCATTATAGGTGGAAGCAAAATGGCACAGATATTGATTTTACCATGAGCTATCACTACAGGTTGGATGGAGGCAGTTTGGCAATCAGTAGCCCGCGCACAGATCAAGATATTGGCACGTACCAGTGCCTGGCCACCAACCCTCTGGGAACAATTCTGAGCCAGAAGGCGAAGCTCCAATTTGCATATATTGAAGACTTTGAAACCAAAACAAGAAGCACAGTGTCCGTCCGAGAAGGTCAAGGTGTGGTGCTTCTCTGTGGTCCACCGCCACACTTTGGAGGTTTATCTTATGCGTGGACTTTCAATGATAACCCCTTATATGTCCAAGAGGACAACAGGCGGTTTGTCTCACAAGAGACAGGAAACTTGTACATCGCCAAAGTGGAGCCATCAGATGTTGGCAACTACACTTGCTACATAACAAACAAAGAAGCCCAGCGAAGTGTTCAAGGACCACCCACTCCATTAGTGCAGCGTACTGATGGTGTGATGGGGGAATATGAACCAAAGATTGAAGTGCATTTTCCTGAAACTATTCAAGCTGCAAAGGATTCATCTATAAAACTGGAATGCTTTGCCCTTGGAAATCCAGTCCCTGATATTAGTTGGAGGAGGTTGGATGGAAGCCCGTTGCCTGGGAAAGTCAAGTACAGCAAATCCCAAGCTATCCTTGAAATCCCAAACTTTCAACAGGAAGATGAAGGCGTCTATGAGTGCATTGCAAGTAACCTTCGAGGAAGAAATCTTGCAAAAGGTCAACTCATTTTCTATGCCCCTCCAGAATGGGAACAAAAAATCCAAAATACATACCTGTCCATCTATGACAGCTTGTTTTGGGAATGCAAAGCTAGTGGAAAGCCAAACCCTTGGTACAYGTGGTTAAAGAATGGTGAACGCCTCAATCCAGAGGAAAGAATTCAAATAGAAAATGGGACACTTATCATAACTATGCTGAATGTGTCAGATTCTGGTATCTACCAATGTGCTGCAGAAAACAAATATCAGATAATTTATGCAAATGCAGAATTGAGAGTATTAGCCTCAGCTCCTGATTTCTCCAAAAATCCCATTAAAAAAAATTCAGTTGTTCAAGTTGGTGGGGATATCGTGATCGAATGCAAACCGAATGCTTTCCCTAGGGCCGCCATCTCCTGGAAAAGAGGAATGGAGAGCCTGAGACAAAGCAAAAGAGTGTTCATCCTGAAGGATGGCAGCCTCAAGATACATAACGTTACCAGGTCGGATGCCGGATCATACACTTGCATAGCTACAAATCAGTTTGGTGTTGCCAAGAACACTGGCAGCCTAGTTGTAAAAGAGAGGACTGTTATTACCGTGCCACCTTCCAAAATGGATGTTACAGTTGGCGAGAGTATAGTCCTACCCTGCCAGGTGTCCCATGACCCCTCCATTGAAGTTGTATTTGTATGGTCTTTCAATGGAGATGTCATAGACTTAAAAAAAGGAGTGGCTCATTTTGAGAGGATTGGAGGAGAATCTGTTGGAGATTTGATGATAAGGAATATTCAGTTAAATCATTCAGGAAAATATCTATGCACAGTAAAAACAACTCTCGAAAGTTTATCTGCTGAAGCTGATATCATTGTGAGGGGTCCCCCAGGTCCCCCAGAAGATGTAAGAGTGGAACRTATTTCCAGTACTACTTCTCAACTAAGCTGGAGACCAGGCTCAGATAATAACAGTCCCATTCAAATATTTAGTATTCAGGCTCGGACACCATTTTCTGTGGGTTGGCAGGCTGTTTCTACAGTTCCAGAAATTCTCAATGGTAAGACATACAATGCAACAGTGGTAGGTTTGAGTCCTTGGGTGGAATATGAGTTTCGTGTTGTTGCCGGGAATAGCATTGGGATTGGAGAACCAAGTAAACCATCAGAAGTGTTAAGAACCAAAGCATCAGTCCCTGTCGTGGCACCAACAAACATCAATGGAGGTGGAGGAAGTCGGTCTGAACTCGTCATTACGTGGGAGTCAATTCCAGAAGAACTACAGAATGGAGAGGAATTTGGATACATCATCATGCTGCGGCCAGTTGGCTCAACAACATGGACCAAGGAAAGAGTACCATTTGTAGAATCGTCAAGGTTTGTTTACAGAAATGAAAGCATCACCCCCCTCTCTCCCTTTGAAGTCAAAGTGGGTGTATATAATAAGAAAGGAGAAGGAGCCCTGAGTACCACGTCCATTGTCTACTCTGGGGAAGATGAACCTCAACTGGCCCCAAGGGGAACTTCTGTTCAAAGTTTTTCTGCTTCGGAAATGGAGGTTTCGTGGAATGCTATTGCCTGGAATAGAAACACTGGAAGAGTTCTGGGSTATGAGGTCTTATACTGGACAGATGACTCCAAAGAATCYGTGATTGGTAAAATTAGGGTCAGTGGAAATGTCACAACCAAAAACATCACAGGGCTGAAAGCTAACACCGTCTACTTTGCTTCCGTGAGAGCTTACAACACTGCTGGTACAGGGCCCTCAAGCCCCCCAGTCAATGGGACCACCAAGAAGTCTCCTCCAAGCCAACCACCAGCTAACATTGCCTGGAAGCTGACAAACTCTAAATTATGCCTAAACTGGGAGCATGTAAAAACCATGGAAAATGAGTCTGAAGTATTGGGCTACAAGATTCTGTACCGGCAAAACAGACAGAGTAAAACTCATATTTTGGAAACAAACAACACATCTGCTGAGCTTCTGGTTCCATTTGAAGAGGACTACTTGATTGAAATAAGAACAGTTAGTGATGGTGGGGATGGAAGCAGCAGTGAGGAAATTAGAATTCCAAAAATGTCAAGTTTGAGTTCCAGAGGAGTTTCAGTCTTAGAACCTAGCATCCATTTCCTGTCAAYTGTCATCATGATTTTTTACTGTTTTGCTATTCAGCCTCTTATATGA

Related Sequences

bmy_12792T0 Protein

Length: 1059 aa      View alignments
>bmy_12792T0
MGEILTSANGNEVALEIGNSADTHKCLCRRGAPLGIKALILFLASKRTGDGRLSRPIFTQEPQDVIFPLDLSKSEIILDCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPRTDQDIGTYQCLATNPLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGPPPHFGGLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCYITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVHFPETIQAAKDSSIKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGVYECIASNLRGRNLAKGQLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPNPWYXWLKNGERLNPEERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDIVIECKPNAFPRAAISWKRGMESLRQSKRVFILKDGSLKIHNVTRSDAGSYTCIATNQFGVAKNTGSLVVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAEADIIVRGPPGPPEDVRVEXISSTTSQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSEVLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIMLRPVGSTTWTKERVPFVESSRFVYRNESITPLSPFEVKVGVYNKKGEGALSTTSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESVIGKIRVSGNVTTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNGTTKKSPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHILETNNTSAELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSRGVSVLEPSIHFLSXVIMIFYCFAIQPLI*