Sequence detailsbmy_12800 (Coding sequence)

Part of scaffold_766 (SequenceType object (1))

For more information consult the page for scaffold_766 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RTN4ENSTTRG00000004551 (Bottlenosed dolphin)

Gene Details

reticulon 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004287, Bottlenosed dolphin)

Protein Percentage 78.98%
cDNA percentage 82.34%
Ka/Ks Ratio 0.53277 (Ka = 0.1127, Ks = 0.2115)

RTN4ENSBTAG00000011104 (Cow)

Gene Details

reticulon-4 isoform 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014745, Cow)

Protein Percentage 76.3%
cDNA percentage 83.73%
Ka/Ks Ratio 0.48767 (Ka = 0.1596, Ks = 0.3272)

Additional orthologs identified in other species via the OPTIC pipeline.

RTN4 (Human)   Rtn4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2781 bp    Location:187670..169060   Strand:-
Raw sequence 
>bmy_12800
ATGGATTGGAAGGAGCAGCCAGGTAACACTGTTTCTGCTGGTCAAGAGGATTTTCCATCTGTCCTGCTTGAAACTGCTGCTTCTCTTCCTTCTTTAGCTCCTCTCTCAGCTGCTTCTTTTAAAGAACATGAATACCTTGGTAATTTACCAGCAGTACTACCTACCGAAGGAACACTTCGAGAAATTTCAGATGAAGCTTCTAAAGAATTCTCAGAGAAGGCAAAAAAACCATTTGTAGGCAGAGATTTACCAGAGTTTTCAGAATTGGAATACTCAGAAATGGGATCATCATTCAGTGGCTCTCCAAGAGCAGAATCTGCCATAACAGTAGCAAATCCTAGGGAAGAAATAATTGTGAAGAATAAAGATGAAGAAGAGGACTTAGTTAGTAATAACATCCTTCGTACTCAGCAAGAGTTACCTATAGTCCTTACCAAATCAGTTAAAGAAGAGGATAGGGTTATGTCTCCAGAAAAAACAAAAGACAGTTTTAATGAAAAGGGAATTGTAGCAGAAGCTCCTCTGAGGGAGGAATATGCAGACTTCAAACCATTTGAGCGAGTATGGGAAGTAAAAGATACTTATAAGCAAGATAGTGATGTTTTGGCCGCAGGAGGTAATATAGAGAGCAAATTGGAAGGTAAAGTGGATAAGAAACGTTTTTCAGATAGCCTTGAACAAACAAATCATGAAAAAGATAGTGAAAGCAGTAATGATGATACTTCATTTCCTAGTACACCAGAAGCTATAAAAGAAGGTTCAGGAGCATATATCACATGTGCTCCCTTTAACCCTTCAGCAAACATTCTTCCCTTGTTGGAAGATCATACTTCAGAAAATAAGACAGATGAAAAAAAAATAGAAGAAAAAAAGGCCCAAATTGTAACAGAGAAGAATGCTAGTGCCAAAACATCAAATCTTTTCCTTGTGGCAACACAGGATTCTAAGACAGATTATGACACAACAGATCATTTATCAGAGGTGACTGAGGAAGTAGTGGCAAACATGCCTGAAGGTCTAACCCCAGATTTAGTACAGGAAGCATGTGAAAGTGAATTGAGTGAAGCTACAGGTACAAAAATTGCCTTCGAAACAAAAATGGACTTGGTTCAAACTTCAGAAGCTATGCAGGAGTCACTTTACCCTGTAGCACAGCTTTGCCCATCCTTTGAAGAATCTGAAGCTACTCCTTCACCAGTTTTGCCTGACATTGTCATGGAAGCACCATTAAATTCTATAGTTCCTAGTGCTGGTGCTTCTGCAGTGCAGGTCAGTTCATCACCATTAGAAGCTCCTCCTTYGGTTAATTATGAAAGCATAAAACTTGAGCCTGAAAATCCCCCACCATATGAAGAGGCCATGAATGTATCACTAAAAAAAGTATCAGGAATGAATGAAGAAATTAAAGAGCCTGAAAGTATTAGTGTAGCTGTTCAAGAAACAGAAGCTCCTTATATATCTATTGCATGTGATTTAATTAAAGAAACAAAGCTCTCTACTGAACCAACTCCAGATTTCTCTAGTTATTCAGAAATAGCAAAAGTTGCACAGCTGGTGCCCACTCATTCTGAGCTAGTTGAAGATTCCTCACCTGATTCTGAACCAGTTGACTTATTTAGTGATGATTCAATTCCTGAAGTTCCACAAAAACAAGATGAAGCAGTGATACTTGTAAAAGAAAATCTCATTGAAACTTCATCTGAATCAATGATAGAACATGAAAATAAGGAAAAACTCAGTGCTTCACCACCACCTGAGGGGGGAAAGCCGTATTTGGAATCTTTTCAGTCCAATTTAGATACCACAAAAGATACCTTATCATCTAATGAAGTTTCAACATTGATCCAAAAGGAGAAAATTCCTTTGCAGATGGAGGAGCTCAATACTGCAGTTTATTCAAATGATGGCTTATTTATTGCTAAGGAAGCAAAAATAAGAGAGAGTGAAACATTTTCAGATTCATCTCCAATTGAGATTATAGATGAGTTCCCTACATTTGTCAGTTCTAAAACAGATTATTCTCCTACATTAGCCAGGGAATACACTGACCTAGAAATATCCTACAAAAGTGAAGTTGCTAGTGTCCAGGATGGAGCTGGGTCGTTGCCTTGCTCAGAATTACCCCATGACGTTTCTGTCAAGAGTGTACAGCCTAAAGATGAAGAAAAAGTTCATGTCCCAGATGAGTTCTCCAAAGATAGGGCTGATATTTCAAAGGTGCCCTTACTGCCTCCAGATGTTTCTGCTTTGGATGCTCAAACAGGGATAGGCAGTGTAGTTAAACCCAAAGTTCTTGTGAAAGAAGCTGAGAAAAAACTTCCTTCTGATACGGAAAAAGAGCACAGACCACCATCTGCTATATTTTCACCAGAGCTGAGTAAAACTTCAGAAGTATCTTCATTTAAAAATTTTGATGAACATATCTGTTACCTGTTTCTAATCTTTCAATATAATGGAATAATTTCCAGTAAAAGGTATAAACATTCTAATTTAGATGATTACTGTGTATTTACTGAATATCCTTATGCATTGGAGATAGGTAGTACTGGTGGCAGAGACCAGTTTAGAGTTGCTGTAATTGAAGAAAGAGGAAATTATGAACGGCAGATCGTGACAAGAGATGGACGGTCAGAAGAAAAATTGGAAGGACAAGGAGAATTGTTAGCAGGATTGGTGATAATGTTTCTAAAAGCAATATGTGGAGCTAATTACAGGAACCTTTACAACATCCTTTTAAAAATTGGTTCAATAAAGTATCGTGGGGAAAAGCTGATTAACTAG

Related Sequences

bmy_12800T0 SequenceType object (3)

Length: 927 aa      View alignments
>bmy_12800T0
MDWKEQPGNTVSAGQEDFPSVLLETAASLPSLAPLSAASFKEHEYLGNLPAVLPTEGTLREISDEASKEFSEKAKKPFVGRDLPEFSELEYSEMGSSFSGSPRAESAITVANPREEIIVKNKDEEEDLVSNNILRTQQELPIVLTKSVKEEDRVMSPEKTKDSFNEKGIVAEAPLREEYADFKPFERVWEVKDTYKQDSDVLAAGGNIESKLEGKVDKKRFSDSLEQTNHEKDSESSNDDTSFPSTPEAIKEGSGAYITCAPFNPSANILPLLEDHTSENKTDEKKIEEKKAQIVTEKNASAKTSNLFLVATQDSKTDYDTTDHLSEVTEEVVANMPEGLTPDLVQEACESELSEATGTKIAFETKMDLVQTSEAMQESLYPVAQLCPSFEESEATPSPVLPDIVMEAPLNSIVPSAGASAVQVSSSPLEAPPXVNYESIKLEPENPPPYEEAMNVSLKKVSGMNEEIKEPESISVAVQETEAPYISIACDLIKETKLSTEPTPDFSSYSEIAKVAQLVPTHSELVEDSSPDSEPVDLFSDDSIPEVPQKQDEAVILVKENLIETSSESMIEHENKEKLSASPPPEGGKPYLESFQSNLDTTKDTLSSNEVSTLIQKEKIPLQMEELNTAVYSNDGLFIAKEAKIRESETFSDSSPIEIIDEFPTFVSSKTDYSPTLAREYTDLEISYKSEVASVQDGAGSLPCSELPHDVSVKSVQPKDEEKVHVPDEFSKDRADISKVPLLPPDVSALDAQTGIGSVVKPKVLVKEAEKKLPSDTEKEHRPPSAIFSPELSKTSEVSSFKNFDEHICYLFLIFQYNGIISSKRYKHSNLDDYCVFTEYPYALEIGSTGGRDQFRVAVIEERGNYERQIVTRDGRSEEKLEGQGELLAGLVIMFLKAICGANYRNLYNILLKIGSIKYRGEKLIN*