Sequence detailsbmy_12803 (Coding sequence)

Part of scaffold_766 (SequenceType object (1))

For more information consult the page for scaffold_766 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPS27AENSTTRG00000013947 (Bottlenosed dolphin)

Gene Details

ribosomal protein S27a

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013220, Bottlenosed dolphin)

Protein Percentage 71.62%
cDNA percentage 75.45%
Ka/Ks Ratio 0.47324 (Ka = 0.257, Ks = 0.5431)

RPS27AENSBTAG00000015473 (Cow)

Gene Details

Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000033015, Cow)

Protein Percentage 71.62%
cDNA percentage 73.2%
Ka/Ks Ratio 0.32483 (Ka = 0.2554, Ks = 0.7863)

RPS27A (Minke Whale)

Gene Details

ribosomal protein S27a

External Links

Gene match (Identifier: BACU020152, Minke Whale)

Protein Percentage 65.31%
cDNA percentage 73.02%
Ka/Ks Ratio 0.66774 (Ka = 0.3181, Ks = 0.4764)

Additional orthologs identified in other species via the OPTIC pipeline.

RPS27A (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 465 bp    Location:384278..386963   Strand:+
Raw sequence 
>bmy_12803
CCGCTGCGACAGCGCTCAGGCATTTGGCGTGGCCGTCTAGGAGGCGGGGTCTCCGTGGGGGCCCCGGGAAAGCCCGTGGGCCGGCACGACGCCCTTCTTTTCGGATCCGCCATCTGCGGTGGCATCGCTGCCAATATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAAAAGGAAGAAGAAGTCTTACACCACTCCCAAGAAGAACAAGCATAAGAGAAAGAAGGTTAAGCTGGCTGTCCTGAAATACTATAAGGTGGATGAGAATGGCAAAATCAGTCGCCTTCGTCGGGAGTGCCCTTCCGATGAATGTGGTGCTGGAGTTTTTATGGCCAGCCACTTTGACAGACATTATTGTGGCAAATGTTGTCTGACCTATTGTTTCAACAAACCGGAAGACAAGTGA

Related Sequences

bmy_12803T0 SequenceType object (3)

Length: 155 aa      View alignments
>bmy_12803T0
PLRQRSGIWRGRLGGGVSVGAPGKPVGRHDALLFGSAICGGIAANMQIFVKTLTGKTITLEESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK*