Part of scaffold_786 (SequenceType object (1))

For more information consult the page for scaffold_786 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HMMRENSTTRG00000001155 (Bottlenosed dolphin)

Gene Details

hyaluronan-mediated motility receptor (RHAMM)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001085, Bottlenosed dolphin)

Protein Percentage 88.98%
cDNA percentage 91.32%
Ka/Ks Ratio 0.42529 (Ka = 0.0748, Ks = 0.1758)

BT.12993ENSBTAG00000014773 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019652, Cow)

Protein Percentage 81.64%
cDNA percentage 87.28%
Ka/Ks Ratio 0.40338 (Ka = 0.1103, Ks = 0.2735)

HMMR (Minke Whale)

Gene Details

hyaluronan-mediated motility receptor (RHAMM)

External Links

Gene match (Identifier: BACU003707, Minke Whale)

Protein Percentage 89.95%
cDNA percentage 92.24%
Ka/Ks Ratio 0.47472 (Ka = 0.0683, Ks = 0.1438)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 2025 bp    Location:695371..665745   Strand:-
>bmy_12814
ATGAACACCTCCTCCAAGGTCTGGTACCACTGGCCCCACGGTGTTGCGCACGGAACCACCCCACTGCGCTCCTCAAACGGGGCTGACATACTCCAGTCGCCTCCCGGCCGCGGTGGCACCGAGCGAGCCGAGCGCACGCACAGAATCTCCGCGTTCGAGCCACGCCCCGGCTTCTCCGCTCGGGTCACTGCACATGCGCAGGAAGGTGCTTATGATGTTAAAACTTCAGAAGTATTAAAAGGACCAGTATCCTTTCGGAAGTCACAAAGGTTTAAAAAACAAAAAGCAGAATCTCAACAAAATCTTAATGTTGACAAAGATACTACCTTGCCTGCTTCATCAAGAAAAGTTAAGACTTCGGGATTAAAGAAAGAATCTCAAAAGAATGAAAAAGATTTGAAGATGTTGGAAAAAGAGATTCGTGTTCTTGTGCAGGAACGTGGTGCTCAGGACAAGCGGATCCAGGATCTGGAAGCTGAGTTGGAGAAGAYGGAAGCAAAGCTAAATGCTGCCGTCAGGGAAAAAACATCTCTCTCTGCAAGTAATGCTTCACTGGAAAAACAGCTTATTGAATTAACCAGGACTAATGAGCTACTAAAATCTAAGTTTTCTGATGATAGTAACCAGAAGAATTTGAGAATTCTAAGCCTTGAGTTGATGAAACTTAGAAACAAAAGAGAAATAAAGATGARGAGCATGATGGCTAAACAAGAAGGCATGGAGGTGAAGCTGCAGGTCACCCAGAAGAATCTCGAAGAGTCTCAGGAGAAAATAGCACAACTTGAGGGGAAACTCCTTAAGCAGTCTCTGGAGGAAAATGTTGCTATATTGTCTAAACAAGTAGAAGACATGAATGCTAAATGCCAGCTGCTTGAAAAAGAAAAAGAAGACCTCATCAATAGGGACAGAGAACAGGATGAAAATCTAAACTCTGAGATGCAAAACTTAAAAGAGAGGTCTGTTCTTGAGCAACAAGAACATGAAGAGCTACAACAAAAAGTATTGCAAATTGATTCACTTCTGCAACAAGAGAAGGAATTATCTTCTAGTCTTCAACAGAAGCTATGTTCTTTTCAAGAGGAAATGGTTAAAGAGAGGAATCTCTTTGAGGGAGAATTAAAGCAAGCACTGGATGAGCTAGATAAATTACAGCAAAAGGAGGAACAAGTTGAAAGCCTGAAGCTGAACTGGAGAAAAGTAACGCTGCTCACGCTCAGGCCACACTGCTTTTGCAGGAAAGGTATAACAGTACAGTGCAGAGCCTGGGAGATGTTACTGCTCAATTTGAAAGCATCAGCAGCAAGTGAGATAGAAGATCTTAAGGTGGAGAACATGTCACTTCACGAAAAAGTGGCCAAGGCTGAGAAAAGTGCAGAGGATTTTCAGCATGAGATATTGGCAACTGAGAATGCAAATCAAGAATACGCAAGGATGCTTCTAGATCTGCAGACCAAATCAGCACTTAAAGAAGCAGAAGTTAAAGAAATCACAGTTTCTTCTCTTAAAAAAATAACTGATTTGCAGCACCAACTCAAGCAACAAGGCGAAGACTTTAAGAAACAACTGGAAAAGGGAGAAGCAAGAAAAGCTGGAAAAGAAAACTCAACGGCAGAATTAACTGAGGAAATGAATAAGTGGCGTCTCCTCTATGAAGAATTATATAATAAAACAAAACCTTTTCAGCTACAACTGGATGCATTTGAAGCAGAGAAACAGGCCTTGTTGAATGAACATGGTGCAGCTCAGGAACAGCTAAATAAACTAAGAGATTCGTATGCTAAATTATTGGGTCATCAGAATCTAAAGCAAAAAATCAAGCATGTTGAGGTGTCAAAACTCCGCGCTCAACTTGCTAAAAGAAAACAACGTGAAACAAGACTTCAGGAGGAATTGAATAAAGTTCTGGGTATCAAACACTTTGATCCTTCAAAGGCTTTTCTTCATGAAAGTAAAGAAAATTTTGTTCTCAAAACCCCATTAAAAGAAGCATTGAGCAAGTTATCCATCTTTGTGAAAATTTGTTAA

Related Sequences

bmy_12814T0 SequenceType object (3)

Length: 675 aa      View alignments
>bmy_12814T0
MNTSSKVWYHWPHGVAHGTTPLRSSNGADILQSPPGRGGTERAERTHRISAFEPRPGFSARVTAHAQEGAYDVKTSEVLKGPVSFRKSQRFKKQKAESQQNLNVDKDTTLPASSRKVKTSGLKKESQKNEKDLKMLEKEIRVLVQERGAQDKRIQDLEAELEKXEAKLNAAVREKTSLSASNASLEKQLIELTRTNELLKSKFSDDSNQKNLRILSLELMKLRNKREIKMXSMMAKQEGMEVKLQVTQKNLEESQEKIAQLEGKLLKQSLEENVAILSKQVEDMNAKCQLLEKEKEDLINRDREQDENLNSEMQNLKERSVLEQQEHEELQQKVLQIDSLLQQEKELSSSLQQKLCSFQEEMVKERNLFEGELKQALDELDKLQQKEEQVESLKLNWRKVTLLTLRPHCFCRKGITVQCRAWEMLLLNLKASAASEIEDLKVENMSLHEKVAKAEKSAEDFQHEILATENANQEYARMLLDLQTKSALKEAEVKEITVSSLKKITDLQHQLKQQGEDFKKQLEKGEARKAGKENSTAELTEEMNKWRLLYEELYNKTKPFQLQLDAFEAEKQALLNEHGAAQEQLNKLRDSYAKLLGHQNLKQKIKHVEVSKLRAQLAKRKQRETRLQEELNKVLGIKHFDPSKAFLHESKENFVLKTPLKEALSKLSIFVKIC*