Part of scaffold_777 (Scaffold)

For more information consult the page for scaffold_777 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL4A6 ENSTTRG00000010030 (Bottlenosed dolphin)

Gene Details

collagen, type IV, alpha 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009514, Bottlenosed dolphin)

Protein Percentage 86.46%
cDNA percentage 88.12%
Ka/Ks Ratio 0.78854 (Ka = 0.0749, Ks = 0.095)

COL4A6 ENSBTAG00000013760 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018292, Cow)

Protein Percentage 89.0%
cDNA percentage 89.91%
Ka/Ks Ratio 0.42372 (Ka = 0.0761, Ks = 0.1796)

COL4A6  (Minke Whale)

Gene Details

collagen, type IV, alpha 6

External Links

Gene match (Identifier: BACU017187, Minke Whale)

Protein Percentage 96.69%
cDNA percentage 96.65%
Ka/Ks Ratio 0.3979 (Ka = 0.0218, Ks = 0.0547)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4419 bp    Location:78457..360923   Strand:+
>bmy_12817
ATGCACCCTGGGTTGTGGCTTCTCCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGGAGCGGGAGAGAAGAAGCCCTATGGAAAGCCATGTGGAGGCCAAGACTGCATTGGGGGCTGTAAATGCTCTCCTGAGAAAGGAGCCCGAGGGCGACCAGGACCAATTGGAATTCAAGGTCCAGTGGGTCCTCAAGGATTTCCTGGCCCTAGTGGTTTATCAGGGTTGAAAGGAGAAAGGGGCTCCCCAGGACCTCTGGGACCGTATGGACCAAAAGGAGATAAGCTTGTCGGAGTAGCTGAGAGTCCTGTGGCTGACTTGATCCCTTCTTTCTCTTTGAACAGGGCCACCCTGGACAGCCAGGGCCCAGAGGCCCACCTGGCCTGGATGGCTGTAATGGAACTCAAGGAGCTGTTGGATTTCCAGGCCCTGATGGCTATCCCGGCCTTCTCGGACCACCCGTATGCTGCCAGATCTTTGTACATTATTTCAAATGGCTTTGCTTGCCTCCAGGGGCTTCCTGGTCAAAAAGGCTCTAAAGGTGAACCTATCCTTGCCCAAGGTAGTTTCAAAGGAATGAAGGGGGAGCCTGGGCTGCCCGGACTGGATGGAATCACTGGTCCTCCAGGCCCCCCTGGTTTCCCTGGTCCTGATGGGAATATGGGGTTAGGTTTCCAAGGAGAGAAAGGAGTCAAGGGGGATGTTGGCCTGCCTGGCCCTGCAGGACCCCCACCATCTACTGGGGAACTGGAATTCATGGGATTTCCCAAAGGGAAGAAAGGATCCAAGGGTGAACCAGGGCTTCAGGGCTTCCCAGGAATAAGTGGTCCTCCAGGTCTCCCGGGATTTGGAATTGCTGGAGAAAAAGGAGAAAAGGGAATCCCTGGTTTGCCGGGACCTAGGGGTCCCGTGGGTTTAGAAGGAGTCCAAGGCCCTCCAGGGAGTCAGGGCAAGAAGGGGTCTTCAGGTTTCCCCGGGCTTAATGGATTCCCAGGAATTAAGGGTGAAAAGGGTGACATTGGCCTGCCAGGCCCAGATGTTTTCATCGATACAGATGGTGCTGTGATCTCAGGTTATCCTGGAGACCCCGGTATGCCAGGCCTCCCAGGCCTTAAAGGAGATGAAGGCATCCAGGGCCTGCCTGGCCCTCCTGGTGCTCCTGGATTACCAGCTTTGCCAGGTGGCCCCGGTGCTCTAGGGCTCCAGGGAGTTCCAGGCCTGAAGGGGGACCAAGGAAACCCCGGCCGCACCACAAYTGGGGCAGCTGGCCTCCCTGGCAGAGATGGTTTGCCAGGCCTACCAGGCCTACCAGGCCCACCCGGTCCAGCATTTGAGACGGGAACTCTACAGAGCACAGAGCCAGGGTTGCCTGGTCTCCGAGGAGAACGAGGTCCAAAAGGAAACCCAGGCCTCAAAGGAATCAAAGGGGACTCAGGTTTTTGTGCTTGTGATGGTGGTGTCCCAAACATTGGACCACCTGGGGAGCCAGGCCTGCCTGGGCCACCAGGTCTCCTGGGCCTTCCGGGCCTGAAAGGAACGAGAGGAGATCCAGGCTCTGGGGGTGCACAGGGCCYGTCAGGGGATCCAGGTGTATTTGGGCCTCGAGGTCTGGCAGGCCCCAAAGGAAAGAAAGGGGAAGCGACWCTCAGTACGGGATCAGGGATGCCAGGAGATCAGGGTGATCCTGGTCCCCAGGGGCTCCCTGGTGAGACAGGAGCCCCAGGCAGGGACGGAGTACCAGGTTTACCAGGCCTGCCAGGCTTTCAGGGTGATGGTGGACAGGGCTTCCCAGGTGAAAAGGGGTTACCAGGACTTCCTGGTGAAAAAGGCCGCACTGGTCCAATTGGCCCCCCAGGAATTGGGCTACCAGGATCTTCTGGACCTCGTGGGCTTCCTGGAGATAAAGGAGTAGATGGATTCCCAGGGCAACCAGGCCCCCCCGGGATTCCAGGTGACTGCTGCTGCAGGGAGAAGGTTGGGCAAGGAGACTTAGACACAGAGGGAGGTGAGAGGTATCACCTTGCCTTGTATTATTCCTGGGCCATACGGTCCATCAGGATTCCCAGGAGCTCCCGGATTCCCAGGTATGGAATGAGGCCAGAAAAAGCCACTGAGCACACTTGCCCTAACGGGGCCCGTGGCCTCCCTGGGACTCCAGGCCAGCCTGGATTGCGTGGAAATAAAGGAGAGCCCGGAAGTCCAGGATTGGTTCACCTCCCTGAATTGCCAGGATTTCCTGGACCTCGTGGAGAGAAGGGCTTGCCTGGGTTTCCTGGGCTCCCTGGAAAAGATGGCTTGCCTGGGAAAGTTGGCAGTCCCGGCTTACCAGGTCCCAAGGGAGCCCCTGGTGACATCATTGGTGCTGAAAACGGTGCTCCTGGGGAGCAAGGCCTACAGGGACTGCCAGGGGACAGAGGATTTCCTGGAGACTCTGGCCTTACAGGACCCAAGGGTTTGCTTGGGAAGTCGGGCCTGCTCGGCCCCAAAGGTGAGCGGGGCAGCCCTGGAATACCAGGCCGCGCAGGACAGCTAGGCCCCCGGGGGTCTGGTGGTCTATTCGGCATCAAGGGCAAACCCGGGCTCCCAGGAGCACCAGGCTTTCCAGGCACTGCAGGACATCCTGGAAAGAAAGGTCCAAGAGGCGATATAGGTCCCCCTGCATCAGCTGGAAAGAGAGGCCTGCCTGGGCTGAAAGGCCTTCCGGGATCTCCAGGGCTAATTGGCTTCCTGGGGAACTCCGGCTTGCCAGGGGCCACTGGACTGCCAGGCCTGCCAGGTCCGAAGGGAGATCAAGGCCAGACACTTGGAATTTCTGGTAGCCCAGGACCCAAGGGACAACCTGGGGAGCCTGGTTTCAAAGGTGTGAAAGGAAAAGATGGACCAGTTGGTGATGTGGGTTTCCCAGGAAACAAAGGTGAAGATGGGAAAGTTGGTATTTCTGGAGATGTTGGCCTTCCTGCCTCCCCAGGTTTCCCAGGTCTCCAGGGCCCCGCTGGTCTCCCTGGTGCCCCAGGCCTCTCCTTGCCCTCAGTCATAGCAGGACAGCCTGGCGACCCCGGGCGACCAGGCCTAGATGGAGAACGAGGCCGCCCAGGCCCCCCGGGGCCCCCAGGCCCCCCTGGGCCATCCTCGGATCAAGGCGACCCGGGAGACCCTGGCTTCCCTGGAATTCCTGGCCCTCAAGGGCCCAAGGGAGACCAAGGAATTCCAGGTTTCTCTGGCCTCCCTGGAGAGCTAGGACTGAAAGGCATGAGAGGTGAGCCTGGCTTCATGGGGACTCCAGGCAAAGTTGGACCACCTGGAGACCCAGGACTTCCCGGGATGAAGGGGAAGGCAGGGCCAAGAGGCTTATCCGGCCCCCGAGGTGCTCCTGGACAAACACCAATTGCAGAAGACATCCAGGCTCCTCCTGGACCCATGGGTCTAACAGGCATCGATGGCATCCCTGGCCTCATGGGGGACCCTGGGGTCCAAGGCCCTGGAGGCCTACAAGGCTTCAAAGGTTTACCTGGCATCCCTGGCAAAGATGGCCCCAATGGACTCCCTGGCCCACCTGGGGCTCTTGGTGACCCTGGTCGCCCTGGACTGCAAGGCCCTCCAGGATTTGAAGGTCTGGCAATGTCGGCACTAGGGGGCAGAGGGCTTCTCAGGTCCTTGGTTATCTCTGCTCTCTCCATCTCAGGAGCTCCAGGGAAGCCGGGCCCCTTCGGGAGGGCTGGAGTGCCTGGGCAGAGCGTGAGAGTGGGCTACACCTTGGTGAAGCACAGCCAGTCGGAACAGGTGCCCCTGTGCCCCGTCGGGATGAGCCAGCTGTGGGTGGGTTATAGCCTGCTGTTCGTGGAGGGGCAGGAGAAAGCCCACAACCAGGACCTAGGGTTTGCTGGCTCCTGCCTGCCCCGCTTCAGCACCATGCCCTTCATCTACTGCAACATCAACGAAGTGTGCCACTATGCCCGGCGCAACGATAAATCCTACTGGCTCTCCACCACCGCGCCCATCCCCATGATGCCCGTCGGCCAGACGCAGATTCCCCAGTACATCAGCCGCTGCTCTGTGTGTGAGGCGCCCTCACAAGCCATTGCTGTGCACAGCCAGGACATCACCATCCCGCAGTGCCCCCTGGGCTGGCGCAGCCTCTGGATTGGGTACTCCTTCCTCATGCACACGGCCGCCGGCGCTGAGGGCGGGGGCCAGTCCCTGGTCTCCCCCGGCTCCTGCCTAGAGGATTTCCGAGCCACTCCTTTCATCGAGTGCAGTGGTGCCCGGGGCACCTGCCACTACTTTGCCAACAAGTACAGCTTCTGGCTGACGACGGTGGAAGAGAGGCAGCAGTTTGGGGAGGAGCCCGTATCTGAGACGCTGAAAGCCGGGCAGCTCCACACCCGGGTCAGCCGCTGCCAGGTGTGTATGAAAAGCGTGTAG

Related Sequences

bmy_12817T0 Protein

Length: 1473 aa      View alignments
>bmy_12817T0
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCIGGCKCSPEKGARGRPGPIGIQGPVGPQGFPGPSGLSGLKGERGSPGPLGPYGPKGDKLVGVAESPVADLIPSFSLNRATLDSQGPEAHLAWMAVMELKELLDFQALMAIPAFSDHPYAARSLYIISNGFACLQGLPGQKGSKGEPILAQGSFKGMKGEPGLPGLDGITGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGLQGFPGISGPPGLPGFGIAGEKGEKGIPGLPGPRGPVGLEGVQGPPGSQGKKGSSGFPGLNGFPGIKGEKGDIGLPGPDVFIDTDGAVISGYPGDPGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGLQGVPGLKGDQGNPGRTTXGAAGLPGRDGLPGLPGLPGPPGPAFETGTLQSTEPGLPGLRGERGPKGNPGLKGIKGDSGFCACDGGVPNIGPPGEPGLPGPPGLLGLPGLKGTRGDPGSGGAQGXSGDPGVFGPRGLAGPKGKKGEATLSTGSGMPGDQGDPGPQGLPGETGAPGRDGVPGLPGLPGFQGDGGQGFPGEKGLPGLPGEKGRTGPIGPPGIGLPGSSGPRGLPGDKGVDGFPGQPGPPGIPGDCCCREKVGQGDLDTEGGERYHLALYYSWAIRSIRIPRSSRIPRYGMRPEKATEHTCPNGARGLPGTPGQPGLRGNKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGKVGSPGLPGPKGAPGDIIGAENGAPGEQGLQGLPGDRGFPGDSGLTGPKGLLGKSGLLGPKGERGSPGIPGRAGQLGPRGSGGLFGIKGKPGLPGAPGFPGTAGHPGKKGPRGDIGPPASAGKRGLPGLKGLPGSPGLIGFLGNSGLPGATGLPGLPGPKGDQGQTLGISGSPGPKGQPGEPGFKGVKGKDGPVGDVGFPGNKGEDGKVGISGDVGLPASPGFPGLQGPAGLPGAPGLSLPSVIAGQPGDPGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDPGFPGIPGPQGPKGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGAPGQTPIAEDIQAPPGPMGLTGIDGIPGLMGDPGVQGPGGLQGFKGLPGIPGKDGPNGLPGPPGALGDPGRPGLQGPPGFEGLAMSALGGRGLLRSLVISALSISGAPGKPGPFGRAGVPGQSVRVGYTLVKHSQSEQVPLCPVGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGEEPVSETLKAGQLHTRVSRCQVCMKSV*