Sequence detailsbmy_12819 (Coding sequence)

Part of scaffold_777 (SequenceType object (1))

For more information consult the page for scaffold_777 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATG4AENSTTRG00000010028 (Bottlenosed dolphin)

Gene Details

autophagy related 4A, cysteine peptidase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009510, Bottlenosed dolphin)

Protein Percentage 89.37%
cDNA percentage 91.58%
Ka/Ks Ratio 0.56735 (Ka = 0.0777, Ks = 0.1369)

ATG4AENSBTAG00000013724 (Cow)

Gene Details

cysteine protease ATG4A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018239, Cow)

Protein Percentage 88.26%
cDNA percentage 88.81%
Ka/Ks Ratio 0.26566 (Ka = 0.0776, Ks = 0.2922)

ATG4A (Minke Whale)

Gene Details

autophagy related 4A, cysteine peptidase

External Links

Gene match (Identifier: BACU017188, Minke Whale)

Protein Percentage 64.02%
cDNA percentage 70.73%
Ka/Ks Ratio 0.62512 (Ka = 0.3374, Ks = 0.5397)

Genome Location

Sequence SequenceType object (2)

Length: 1104 bp    Location:390971..377858   Strand:-
Raw sequence 
>bmy_12819
TTCTTTCTTTTTCTTTCAGTTTTATCCAAGTATGAAAACCAGATTACTATTTTCGCTGACTACCTAGAAGAATTTCCAGATACAGATGAGCTGGTATGGATCTTGGGGAAACAGCATCTCCTTAAAACCGAAAAATCTAAGCTGTTGTCTGATATAAGTGCTCGTCTATGGTTTACATACAGAAGGAAATTTTCACCAATTGAACCTGTTTTGGTTAACTCAGCATTATCTTTGCAAGTTCCACCCTGTAACAAACTCTGTTTGATGTCTGGCTATATCTCTTGCCTCTCTATTCCGAGTATGTGTGCCTGTCTGTCTTGTATGATTCCCAAATATGCTGATGTTTCGGGAAAGGGCAGTTCAAGGAACTCATATTCATTCCCATCCATTTTGCCAACAGGGGGAACGGGCCCTTCTTCAGACGCCGGCTGGGGATGTATGCTACGCTGTGGACAGATGATGCTGGCTCAAGCCCTTATCTGCAGACACTTGGGCAGGGACTGGAACTGGGAGAAACAGAAAGAACAACCCAAAGAATACCAACGAATCCTACAGTGCTTCCTAGATAGAAAAGACTGTTGCTACTCTATCCATCAAATGGCACAGATGGGTGTAGGAGAAGGGAAATCAATTGGCGAATGGTTTGGACCAAATACAGTTGCACAGGTGTTAAAAAAACTTGCTTTATTTGATGAATGGAATTCCTTGGCTGTTTATGTTTCAATGGATAACACCGTGGTTATTGAAGATATCAAAAAAATGTGCCGCACCCTCCCCTTGAGCGCCGAAACAGCTGCTGAGAGCCCCCCTGAGTCTCTGAGTGCTTCGACCCAGAGTAAGGGCCCCGCTGCCTGCTCTCCAGCCTGGAAACCCTTGCTGCTCATTGTGCCCCTCCGCCTGGGCATAAACCAAATCAATCCTGTCTATGTCGACGCCTTCAAAGAGTGTTTTAAGATGCCACAGTCTTTAGGGGCATTAGGAGGAAAACCAAATAACGCCTATTATTTCATAGGATTCTTAGGTAAGAAAAGAGGAATCACAAGTAGGGTTTCTCCACAGCTGCTGGGGCTCTCTCGAATGCTGCCATCTACTGGTCGATCCTAA

Related Sequences

bmy_12819T0 SequenceType object (3)

Length: 368 aa      View alignments
>bmy_12819T0
FFLFLSVLSKYENQITIFADYLEEFPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIEPVLVNSALSLQVPPCNKLCLMSGYISCLSIPSMCACLSCMIPKYADVSGKGSSRNSYSFPSILPTGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRTLPLSAETAAESPPESLSASTQSKGPAACSPAWKPLLLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGKKRGITSRVSPQLLGLSRMLPSTGRS*