Sequence detailsbmy_12833 (Coding sequence)

Part of scaffold_790 (SequenceType object (1))

For more information consult the page for scaffold_790 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF216ENSTTRG00000010772 (Bottlenosed dolphin)

Gene Details

ring finger protein 216

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010213, Bottlenosed dolphin)

Protein Percentage 47.89%
cDNA percentage 48.05%
Ka/Ks Ratio 0.40384 (Ka = 0.0032, Ks = 0.0078)

RNF216ENSBTAG00000017175 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF216

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022820, Cow)

Protein Percentage 83.78%
cDNA percentage 87.07%
Ka/Ks Ratio 0.41008 (Ka = 0.1094, Ks = 0.2668)

RNF216 (Minke Whale)

Gene Details

ring finger protein 216

External Links

Gene match (Identifier: BACU012138, Minke Whale)

Protein Percentage 99.19%
cDNA percentage 99.46%
Ka/Ks Ratio 0.40505 (Ka = 0.0038, Ks = 0.0095)

Additional orthologs identified in other species via the OPTIC pipeline.

RNF216 (Human)   Rnf216 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1848 bp    Location:145693..187553   Strand:+
Raw sequence 
>bmy_12833
ATGCTGGTCACCCCAGCTCCTCAGCAGCATGATGAAGAGGACCTGGATGATGATGTCATCCTGGCGGAAACAAATAAACCTCAGACATCACGACCCAATCTCATCAAACCAGCTGCCCAGTGGCAAGATCTCAAAAGATGGGGAGAAGAAAGGCCTAAAAAGTCTAGAGCAGCCTTTGAATCAGATAAGAACGGCTTTTTTTCTGTGTGTAACAGCTCGTTGTTTGGTTCTGGGGCACAGGATAATTCTGAGGATAACTACGGTGAATTTCTAGATCTTGGGCCTCCTGGAGTTTCTGAATTCATTAAGCCAAGTGGACAAACAGAAAGAGAACCCAAGCCTGGACCAAGTCATAACCAAGCAACAAATGACATTGTCAACCACAGAGCAGAGCAGAAAATCATTATCCTGAAAGAAGGTAGCCTTCTTTTTCCAGAAAGTGATCCTTTGGACACTCAGAACCAGTCATCTGAAGACTCAGAGACAGAGCTTTTATCAAACCTCGGAGAATCAACTGATATCCTAGATGACCAGGCCATCGAAGAAGACTGCTGGTTAGACCATCCTTACTTCCAGTCTCTGAACCAACAGCCCCGTGAGATAACAAACCAGGTTGTGCCTCAGGAGCGGCAGCCTGAAGTAGAACTGGGCCCACTGTTGTATCAGCATGAACCCTCAGGGTCAGCTTTTCCAAGACCGGCTTTTCCAAGACCAGAACCCCAGCAGGATGGGATTCCAGGCCCTTCTTCTCCTCAGCCTGCCCATCCTCTGGGAGAGCTTGAAGACCAACAGTTAGCAATAGATGATGAAGAGCCAGGTCCAGCCTTTCCACTGCAAGGATCTCAGGAGCCCAATTTGGAAAACCTTTGGGGGCAAGAAGCTCCTGACGTAGACCAAGAACTCATTGCACTATTAGTGAAAGAAACAGAAGTAAGATTTCCAGATGTAGCACATGGACTTTGTAATTTTCTTCTGGAAAATCCAGATTATCCAAAGAGAGAAGATAGATTGCCTAAAATAGACTTTTTTGACTATTCTAAATTGGCTCCTCTTGACCAGCGCTGCTTCATCCAAGCTGCTGACCTCCTGATGGCCGACTTCAAAATGCTCAGCAGTCAGGACATCAAGTGGGCCCTGCATGAGCTCAAAGGACACTATGCAATCACCCGAAAGGCCTTTTCTGATGCCATTAAAAAATGGCAGGAGCTATCGCCAGAAACCAGTGGAAAAAGAAAAAAGAGAAAAGAAATGAATCAGTATTCTTACATAGATTTCAAATTTGAACAAGGTGACAAAAAAATAGAAAAGAGGATGTTCTTTCTGGAAAATAAGCGGCGACATTGTAGGTCTTATGACCGGCGTGCTCTCCTTCCAGCTGTGCAGCAAGAGCAGGAGTTCTATGAGCAGAAAATCAAAGAGATGGCAGAGCATGAAGACTTTTTGCTTGCCCTGCAGATGAATGAAGAACAGTATCAAAAGGATGGCCAGTTGATTGAGTGCCGCTGCTGCTACGGGGAATTTCCATTTGAGGAACTGACGCAGTGTGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGATCTGGAAAGTCAGAGCTCAGCTGCATGGAAGGCAGCTGCACATGTTCATTCCCAACCAGTGAACTGGAGAAGGTGCTTCCCCAGACCATCCTGTATAAATACTATGAGCGAAAAGCAGAAGAAGAAGTTGCTGCAGCCTACGCTGATGAGCTTGTCAGGTGCCCCTCCTGCAGCTTTCCTGCTCTGTTGGACAGTGATGTGAAGAGGTTCAGTTGTCCCAATCCTCGCTGCCGAAAGGTA

Related Sequences

bmy_12833T0 SequenceType object (3)

Length: 616 aa      View alignments
>bmy_12833T0
MLVTPAPQQHDEEDLDDDVILAETNKPQTSRPNLIKPAAQWQDLKRWGEERPKKSRAAFESDKNGFFSVCNSSLFGSGAQDNSEDNYGEFLDLGPPGVSEFIKPSGQTEREPKPGPSHNQATNDIVNHRAEQKIIILKEGSLLFPESDPLDTQNQSSEDSETELLSNLGESTDILDDQAIEEDCWLDHPYFQSLNQQPREITNQVVPQERQPEVELGPLLYQHEPSGSAFPRPAFPRPEPQQDGIPGPSSPQPAHPLGELEDQQLAIDDEEPGPAFPLQGSQEPNLENLWGQEAPDVDQELIALLVKETEVRFPDVAHGLCNFLLENPDYPKREDRLPKIDFFDYSKLAPLDQRCFIQAADLLMADFKMLSSQDIKWALHELKGHYAITRKAFSDAIKKWQELSPETSGKRKKRKEMNQYSYIDFKFEQGDKKIEKRMFFLENKRRHCRSYDRRALLPAVQQEQEFYEQKIKEMAEHEDFLLALQMNEEQYQKDGQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSDVKRFSCPNPRCRKV