Part of scaffold_797 (Scaffold)

For more information consult the page for scaffold_797 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL4A3BP ENSTTRG00000009717 (Bottlenosed dolphin)

Gene Details

collagen, type IV, alpha 3 (Goodpasture antigen) binding protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009220, Bottlenosed dolphin)

Protein Percentage 90.73%
cDNA percentage 91.59%
Ka/Ks Ratio 0.52286 (Ka = 0.0399, Ks = 0.0762)

COL4A3BP ENSBTAG00000000081 (Cow)

Gene Details

Collagen type IV alpha-3-binding protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000092, Cow)

Protein Percentage 96.34%
cDNA percentage 95.11%
Ka/Ks Ratio 0.1319 (Ka = 0.0204, Ks = 0.1548)

COL4A3BP  (Minke Whale)

Gene Details

collagen, type IV, alpha 3 (Goodpasture antigen) binding protein

External Links

Gene match (Identifier: BACU019606, Minke Whale)

Protein Percentage 90.95%
cDNA percentage 93.46%
Ka/Ks Ratio 0.91354 (Ka = 0.0679, Ks = 0.0743)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1395 bp    Location:243493..372232   Strand:+
>bmy_12861
ATGTCGGATAACCAGAGCTGGAACTCGTCTGGCTCGGAGGAGGATCCGGAGACGGAGTCCGGGCCGCCTGTGGAGCGCTGCGGGGTCCTCAGCAAGCCTCATGATTTTGATGAATGTCGCTTTGATATTAGTGTAAATGATAGTGTTTGGTATCTTCGTGCTCAGGATCCAGATCACAGACAGCAGTGGATAGATGCCATTGAACAGCACAAGAAGGGCCACAGTTTACGTGAGAAATTGGCTGAAATGGAAACCTTTAGAGATATCCTATGCAGACAAGTCGATACTCTACAGAAGTACTTTGATGCCTGTGCTGATGCTGTCTCCAAGGATGAACTTCAAAGGGATAAAGTGGTAGAAGATGATGAAGATGACTTTCCTACAACACGTTCTGATGGAGACTTCTTGCATAATACCAATGGCAATAAAGAAAAGGTATTTCCACATGTAACACCAAAAGGAATTAATGGTATAGACTTTAAAGGGGAGGCGATAACTTTTAAAGCAACTACTGCTGGAATCCTTGCTACACTTTCTCATTGTATTGAACTAATGGTAAAACGTGAGGACAGCTGGCAAAAGAGACTGGATAAGGAAAGTGAGAAGAGAAGAAGAATAGAGGAAGCATACAAAAATGCCATGACAGAACTTAAGAAAAAATCTCACTTTGGAGGACCAGATTATGAGGAAGGCCCAAACAGTTTGATTAATGAGGAAGAGTTCTTTGATGCTGTTGAAGCTGCTCTTGACAGACAAGATAAAATAGAAGAACAGTCACAGAGTGAAAAGGTCAGGTTACATTGGCCTACATCAATGCCATCTGGAGATGCCTTTTCTTCTGTGGGGACTCACAGATTTGTCCAAAAGCCCTATAGTCGCTCTTCCTCCATGTCTTCCATTGATCTAGTCAGTGCCTCTGACGATGTTCACAGATTCAGCTCCCAGGTTGAAGAGATGGTGCAGAACCACATGACTTACTCATTACAGGATGTAGGTGGAGATGCCAATTGGCAGTTGGTTGTAGAAGAAGGAGAAATGAAGAAATGGAAACAAGGTTATGACAAAGCAACTATAGAAAACTTTCATGTGGTGGAAACATTAGCTGATAATGCAATCATCATTTATCAAACGCACAAGCTAAACAATCGATGTGTCCGTGCCAAAATAAATATTGCTATGATTTGTCAAACCTTGGTAAGCCCGCCAGAGGGAAACCAGGAGATTAGCAGGGACAACATTCTATGCAAGATTACATATGTAGCTAATGTAAACCCTGGAGGATGGGCACCAGCCTCAGTGTTAAGGGCAGTGGCAAAGCGAGAGTATCCAAAGTTTCTAAAACGTTTTACTTCTTACGTACAAGAAAAAACTGCAGGAAAACCTATTTTGTTCTAG

Related Sequences

bmy_12861T0 Protein

Length: 465 aa      View alignments
>bmy_12861T0
MSDNQSWNSSGSEEDPETESGPPVERCGVLSKPHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHKKGHSLREKLAEMETFRDILCRQVDTLQKYFDACADAVSKDELQRDKVVEDDEDDFPTTRSDGDFLHNTNGNKEKVFPHVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKREDSWQKRLDKESEKRRRIEEAYKNAMTELKKKSHFGGPDYEEGPNSLINEEEFFDAVEAALDRQDKIEEQSQSEKVRLHWPTSMPSGDAFSSVGTHRFVQKPYSRSSSMSSIDLVSASDDVHRFSSQVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKKWKQGYDKATIENFHVVETLADNAIIIYQTHKLNNRCVRAKINIAMICQTLVSPPEGNQEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTAGKPILF*