Sequence detailsbmy_12878 (Coding sequence)

Part of scaffold_785 (SequenceType object (1))

For more information consult the page for scaffold_785 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPRN2 (Minke Whale)

Gene Details

protein tyrosine phosphatase, receptor type, N polypeptide 2

External Links

Gene match (Identifier: BACU000754, Minke Whale)

Protein Percentage 18.52%
cDNA percentage 37.65%
Ka/Ks Ratio 0.1079 (Ka = 1.4897, Ks = 13.8057)

Additional orthologs identified in other species via the OPTIC pipeline.

PTPRN2 (Cow)   PTPRN2 (Human)   Ptprn2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 327 bp    Location:732723..729971   Strand:-
Raw sequence 
>bmy_12878
ATGGTGTGGGAGAGCGGCTGTGTGGTCATCGTCATGCTGACCCCCCTCTCGGAGAACGGCGTCAGGCAGTGTTACCACTACTGGCCGGACGAGGGCTCCAACCTCTACCACGTCTACGAGGTGCATCTGGTCTCTGAGCACATCTGGTGCGAGGATTTCCTCGTGAGGAGCTTTTATCTGAAGAACCTTCAAACCAACGAGACTCGCACGGTGACGCAGTTCCACTTCCTGAGCTGGTATGACCAGGGAGTGCCTTCCTCCACGAGGTCCCTTCTGGATTTCCGCAGAGTCCCAGGAGATAGGGCCCGAGAAGGTTTCGGTAAATAA

Related Sequences

bmy_12878T0 SequenceType object (3)

Length: 109 aa      
>bmy_12878T0
MVWESGCVVIVMLTPLSENGVRQCYHYWPDEGSNLYHVYEVHLVSEHIWCEDFLVRSFYLKNLQTNETRTVTQFHFLSWYDQGVPSSTRSLLDFRRVPGDRAREGFGK*