Sequence detailsbmy_12887 (Coding sequence)

Part of scaffold_799 (SequenceType object (1))

For more information consult the page for scaffold_799 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PVRL3ENSTTRG00000002714 (Bottlenosed dolphin)

Gene Details

poliovirus receptor-related 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002544, Bottlenosed dolphin)

Protein Percentage 99.45%
cDNA percentage 99.15%
Ka/Ks Ratio 0.088 (Ka = 0.0025, Ks = 0.0279)

PVRL3ENSBTAG00000013769 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000032266, Cow)

Protein Percentage 96.08%
cDNA percentage 96.21%
Ka/Ks Ratio 0.20029 (Ka = 0.0213, Ks = 0.1063)

PVRL3 (Minke Whale)

Gene Details

poliovirus receptor-related 3

External Links

Gene match (Identifier: BACU009345, Minke Whale)

Protein Percentage 99.4%
cDNA percentage 99.34%
Ka/Ks Ratio 0.12703 (Ka = 0.0026, Ks = 0.0207)

Additional orthologs identified in other species via the OPTIC pipeline.

PVRL3 (Human)   Pvrl3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1980 bp    Location:276575..211603   Strand:-
Raw sequence 
>bmy_12887
ATGGCGCGGACCCCGGGGCCGGCTCCGCTGTGTCCCGGAGGCGGCAAAGCACAACTTTCCTCCGCTTCTCCCCCCGGGGCCGGGCTCCTGCTGCCGCCCCCGACGCCACCGCCGCTGCTGCTGCTGCTCTTCCCGCTGCTGCTCTTCTCCCGGCTCTGTGCAAACCCTGTTTGTCCTCAGGACTTCGATGTATGTGTAAAATACCTGATTGCATTGACCGTGCCCCAGCTGTTCCGATCAAAACAAGCCCCACGCCTCTTCTCTTTCTTCCCACGTTATCTTATAGTTTTGTCATATTTGGGAGGTAGTCTCTTTAATTCAGTCTTTGAATATGGCACAGTTGTCCTGATTTATGGATACTTAAAAGTTGAAGAAAAGCTTTTTAATTTTTATGATGAGACTTCTCTGTCTTTGGGAGGGGGATGGGAAAAGAACATTGATATGACAAGGTCCAGGAACAGAAAAACTATGCTTTTTTCTTTTTCCTTAGGTGCCTTAGCTGGACCAGTTATTGTGGAGCCACATGTCACAGCAGTGTGGGGAAAGAATGTTTCACTGAAGTGTTTAATTGAAGGAAATGAAACTATAACACAAATTTTATGGGAGAAGATACATGGCAAAAGTGCACAGACTGTTGCAGTTCATCATCCTCAATATGGATTCTCTGTTCAAGGAGAATATCAGGGAAGAGTCTTGTTTAAAAACTATTCACTTAATGATGCAACAATTACTCTACATAACATAGGATTCTCTGATTCTGGGCAATATATATGCAAAGCTGTTACATTCCCACTTGGAAATGCTCAGTCCTCTACAACTGTAACTGTATTAGTTGAACCCACTGTGAGCCTGATAAAAGGGCCAGATTCTTTAATTGATGGAGGAAATGAAACAGTAGCAGCCATTTGTATCGCAGCCACTGGAAAACCAGTTGCACATATTGATTGGGAAGGTGATCTTGGCGAAATGGAATCCACTACGACTTCTTTTCCAAATGAAACAGCAACAATTGTCAGCCAATACAAGCTTTTTCCTACCAGATTTGCTAGAGGAAGGCGGATTACTTGTGTTGTAAAACATCCAGCCTTGGAAAAGGACATCCGATATTCTTTCATATTAGACATACAGTACGCTCCTGAGGTTTCAGTAACAGGCTATGATGGAAACTGGTTTGTAGGAAGAAAAGGTGTTAATCTCAAGTGTAATGCTGATGCAAATCCACCACCCTTCAAATCTGTGTGGAGCAGGTTGGATGGACAGTGGCCTGATGGTTTATTGGCTTCAGACAATACTCTTCATTTTGTCCATCCACTGACTTTCAATTATTCTGGTGTTTATGTCTGTAAAGTGACCAATTCCCTTGGTCAAAGAAGTGATCAAAAGGTCATCTATATTTCCGATCCTCCTACTACTACCACCCTTCAGCCTACAATTCAGTGGCATCCCTCAACTGCTGACTTCAAGGATCTAGCAACAGAACCAAAAAAATTGCCCTTCCCATTGTCAACTTTGGCAACAATTAAGGATGACACAATTGGCACAATCATTGCTAGTGTAGTGGGTGGGGCTCTCTTCGTAGTACTTGTAAGTGTTTTGGCTGGAATATTCTGCTATAGGAGAAGACGGACGTTTCGTGGAGACTACTTTGCCAAGAACTACATTCCACCATCAGATATGCAAAAAGAATCACAGATAGATGTTCTTCAACAAGATGAGCTTGATTCTTACCCAGACAGTGTAAAAAAAGAAAACAAAAATCCAGTGAACAATCTAATACGGAAAGACTATTTAGAAGAGCATGAAAAAACGCAGTGGAACAATGTAGAAAATCTCAGTAGGTTTGAAAGACCAATGGATTATTATGAAGATCTAAAAATGGGAATGAAGTTCGTCAGCGATGAACAGTATGATGAAAATGAAGATGACTTAGTTTCACATGTAGATGGTTCCGTAATTTCCAGGAGGGAGTGGTATGTTTAG

Related Sequences

bmy_12887T0 SequenceType object (3)

Length: 660 aa      View alignments
>bmy_12887T0
MARTPGPAPLCPGGGKAQLSSASPPGAGLLLPPPTPPPLLLLLFPLLLFSRLCANPVCPQDFDVCVKYLIALTVPQLFRSKQAPRLFSFFPRYLIVLSYLGGSLFNSVFEYGTVVLIYGYLKVEEKLFNFYDETSLSLGGGWEKNIDMTRSRNRKTMLFSFSLGALAGPVIVEPHVTAVWGKNVSLKCLIEGNETITQILWEKIHGKSAQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGQYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIVSQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYVCKVTNSLGQRSDQKVIYISDPPTTTTLQPTIQWHPSTADFKDLATEPKKLPFPLSTLATIKDDTIGTIIASVVGGALFVVLVSVLAGIFCYRRRRTFRGDYFAKNYIPPSDMQKESQIDVLQQDELDSYPDSVKKENKNPVNNLIRKDYLEEHEKTQWNNVENLSRFERPMDYYEDLKMGMKFVSDEQYDENEDDLVSHVDGSVISRREWYV*