Part of scaffold_794 (Scaffold)

For more information consult the page for scaffold_794 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM176B ENSTTRG00000013416 (Bottlenosed dolphin)

Gene Details

transmembrane protein 176B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012729, Bottlenosed dolphin)

Protein Percentage 84.47%
cDNA percentage 92.3%
Ka/Ks Ratio 1.26696 (Ka = 0.09, Ks = 0.071)

TMEM176B ENSBTAG00000016766 (Cow)

Gene Details

transmembrane protein 176B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041338, Cow)

Protein Percentage 82.89%
cDNA percentage 88.21%
Ka/Ks Ratio 0.58622 (Ka = 0.1115, Ks = 0.1903)

TMEM176B  (Minke Whale)

Gene Details

transmembrane protein 176B

External Links

Gene match (Identifier: BACU000704, Minke Whale)

Protein Percentage 97.51%
cDNA percentage 97.35%
Ka/Ks Ratio 0.22714 (Ka = 0.0142, Ks = 0.0626)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 801 bp    Location:80443..72412   Strand:-
>bmy_12893
ATGACCCAAAACATGCTGGTTGTGAATGGAGTCGATGTGGCCTCTACGCTGTCCCAGCCCACTCACATCGACATCCACATCCACCAGGAATCCGCTTTGGCACAACTGCTAAAAGCTGGGAGTTCCCTGATGGAGCACCTGTCCCACCGTCCTGCCAAGGCCAGGATAGGCTATGGACAGCTGGCGCTAGGGGTGACCCAGATATTGCTGGGGGCTACGAGCTGTGCTCTTGGAGGGCTTCTCTACTTGGGGCCCTGGATTCAGCTGCGTGCCTCAGGCTGTGCCTTTTGGGCAGGGTTTGTGGCCATTGCAGCAGGAGTTGGGGCCGTTGTCCATGAGAAGCACTGGGGAAAACTTTCAGGCTGCATATCAAGTCTGCTCACCCTGGCTGGCATTGGCACGGCCGTGGCTGCTGTTGTCTTCTGTGTGAATAGTTTAACCTGGCAACCTGATATCTTCTACGACATCAGCTCCGTGTGTGATTCCTTAGTCCCTGCCACCCCCACCTTTGGGTACCAACAGACTGAACGAAGCAATTCCTATTCATCGTGGAAGGAGAAGCGCTGCAGAAACTACATGCAAATGCTGATGGATTTGTTCCTGGGAATCCGTGGTCTGCTCCTGGCCGTCTGTGTCCTGCAGGTCATTGCATCCTTGGCTTCCCTGGGTGTGGGTCTTCGATGCTTCTGTGGCCAGAGCTCCCGGGCCCTGGATGAAGAAGGGTCAGAGGAGAAGCTGTGGGGGAAGAATTCAGTGCCTCCCTCCTCCCACAAGGAGAAGAGCACAGCTGTTGTCCTGTGA

Related Sequences

bmy_12893T0 Protein

Length: 267 aa      View alignments
>bmy_12893T0
MTQNMLVVNGVDVASTLSQPTHIDIHIHQESALAQLLKAGSSLMEHLSHRPAKARIGYGQLALGVTQILLGATSCALGGLLYLGPWIQLRASGCAFWAGFVAIAAGVGAVVHEKHWGKLSGCISSLLTLAGIGTAVAAVVFCVNSLTWQPDIFYDISSVCDSLVPATPTFGYQQTERSNSYSSWKEKRCRNYMQMLMDLFLGIRGLLLAVCVLQVIASLASLGVGLRCFCGQSSRALDEEGSEEKLWGKNSVPPSSHKEKSTAVVL*