Part of scaffold_794 (Scaffold)

For more information consult the page for scaffold_794 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHPF2 ENSTTRG00000000870 (Bottlenosed dolphin)

Gene Details

chondroitin polymerizing factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000821, Bottlenosed dolphin)

Protein Percentage 98.58%
cDNA percentage 98.23%
Ka/Ks Ratio 0.12313 (Ka = 0.0065, Ks = 0.0529)

bta-mir-671 ENSBTAG00000014371 (Cow)

Gene Details

bta-mir-671

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019108, Cow)

Protein Percentage 95.97%
cDNA percentage 92.85%
Ka/Ks Ratio 0.06073 (Ka = 0.0188, Ks = 0.31)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2337 bp    Location:428198..435077   Strand:+
>bmy_12911
ATGGCAGGGCCCACCGCCATGCGACTGAGCTCAGTGTTGGCTCTGCTGCGACCAGCACTGCCCCTCATCCTAGGGCTGTCTCTGGGGTGCAGCCTGAGCCTCTTGCGGGTTTCCTGGATCCAGGGTGAGGGAGAAGATCCCTGTGTAGTGGCTGTGGGGGAACCAGGAGGGCCACAGAATCTAGACTCAGGAACTCAGCTTGACCAAAGTGATGAAGACTTCAAACCCCGGATTGTCCCCTACGACAGGGATCCCAACAAGCCCTACAAGAAGGTGCTCAGGACTCGGTACATCCAGACAGAGCTGGGCTCTCGCGAGCGGTTGCTGGTGGCTGTCCTGACCTCCCGGGCCACACTGTCCACTCTGGCTGTGGCTGTGAACCGCACGGTGGCTCACCACTTCCCTCGGTTACTCTACTTCACTGGGCAGCGAGGGGCCCGGACTCCGGCAGGGATGCAGGTGGTATCTCACGGGGACGAACGGCCAGCCTGGCTCATGTCCGAGACCCTGCGCCATCTTCACACACACTTTGGGGCCGACTACGACTGGTTCTTCGTCATGCAGGATGACACGTATGTGCAGGCCCCCCGCCTGGCAGCCCTGGCTGGCCACCTCAGTATCAACCAAGACCTGTACCTGGGCCGGACGGAGGAGTTCATTGGCGCAGGCGAGCAGGCCCGATACTGCCACGGCGGCTTTGGCTACCTGTTGTCACGGAGCCTCCTGCTTCGATTGTGGCCACATCTGGATGGCTGCCGAGGAGACATCCTCAGTGCCCGTCCTGATGAGTGGCTTGGCCGCTGCCTCATTGACTCTCTGGGCATCGGCTGTGTCTCACAGCACCAGGGGCAGCAGTATCGCTCGTTTGAACTGGCCAAAAATAGGGACCCCGAGAAGGAGGAGAGCTCGGCTTTCCTGAGTGCTTTTGCGGTGCACCCTGTCTCCGAGGGAACCCTCATGTACCGGCTCCACAAGCGCTTCAGTGCTCTGGAGCTGGAACGAGCGTACAGTGAAATAGAACAGCTGCAGGCTCAGATCCGGAACCTGACCGTGCTGACCCCTGAGGGGGAGGCAGGCCTGAGCTGGCCCATTGGGCTCCCCGCCCCTTTTACACCGCACTCTCGTTTTGAGGTGCTGGGCTGGGACTACTTCACAGAGCAGCACACCTTCTCCTGTGCAGACGGGGCCCCCAAGTGCCCACTGCAAGGGGCTAGCAGGGCAGATGTGGGTGACGCCGTGGAGACTGCTTTGGAGCAGCTGAATCGGCGCTATCAGCCCCGCCTGCGCTTCCAGAAGCAGCGGCTGCTCAACGGCTACCGGCGCTTTGATCCAGCGCGGGGCATGGAGTACACCCTGGACTTGCTGCTGGAAGCTGTGACGCAGCGCGGCCACCGGCGGGCCCTGGCCCGCAGGGTCAGCCTGCTGCGGCCCCTGAGCCGGGTGGAGATCCTCCCCATGCCCTACGTCACCGAGGCCACCCGCGTGCAGCTGGTGCTGCCGCTGCTGGTGGCCGAAGCCGCCGCGGCCCCTGCGTTCCTGGAGGCCTTTGCAGCCGGTGTCCTGGAGCCACGAGAGCATGCCTTGCTCACCCTGTTGCTGGTCTATGGGCCACGGGAAGGGGGCCGAGGGGCCCCGGACCCGTTTCTTGGGGTGAAGGCTGCAGCGGCTGAGTTGGAACGACGGTACCCTGGGACAAGGCTGGCCTGGCTCGCTGTGCGCGCGGAGGCCCCTTCCCAGGTGCGGCTCCTGGACGTGGTCTCTAAGAAGCACCCCGTGGACACGCTCTTCTTCCTCACCACCGTGTGGACCAGGCCCGGGCCCGAAGTCCTGAACCGCTGCCGCATGAACGCCATCTCCGGCTGGCAGGCCTTCTTCCCGGTCCACTTCCAGGAGTTCAGCCCCGCCCTGGCACCACAGAGATCTCCCCAGGGGCCCCCGGGGGCCGGCCCCGACCCCCCGTCCCCTCCTGGTGCTGACCCTGCCCGGGGGGCTCCCGCTGGGGGCAGGTTTGACCGACAGGCTTCCGCAGAGGGCTGCTTCTACAACGCGGACTACCTGGCGGCGCGAGCCCGGCTGGCTGGTGAGCTGGCAGGCCAGGAAGAGGAGGAAGCCCTGGAGGGGCTGGAGGTGGTGGATGTTTTCCTCCGGTTCTCAGGGCTCCACCTTTTCCGGGCCGTGGAGCCAGGGCTGGTGCAGAAGTTCTCCGTGCGTGACTGCAGCCCTCGGCTCAGCGAGGAGCTCTACCACCGCTGCCGCCTCAGCAACCTGGAGGGGCTGGGGGGCCGTGCGCAGCTCGCCATGGCTCTGTTTGAGCAGGAGCAGGCCAATAGCACCTAG

Related Sequences

bmy_12911T0 Protein

Length: 779 aa      View alignments
>bmy_12911T0
MAGPTAMRLSSVLALLRPALPLILGLSLGCSLSLLRVSWIQGEGEDPCVVAVGEPGGPQNLDSGTQLDQSDEDFKPRIVPYDRDPNKPYKKVLRTRYIQTELGSRERLLVAVLTSRATLSTLAVAVNRTVAHHFPRLLYFTGQRGARTPAGMQVVSHGDERPAWLMSETLRHLHTHFGADYDWFFVMQDDTYVQAPRLAALAGHLSINQDLYLGRTEEFIGAGEQARYCHGGFGYLLSRSLLLRLWPHLDGCRGDILSARPDEWLGRCLIDSLGIGCVSQHQGQQYRSFELAKNRDPEKEESSAFLSAFAVHPVSEGTLMYRLHKRFSALELERAYSEIEQLQAQIRNLTVLTPEGEAGLSWPIGLPAPFTPHSRFEVLGWDYFTEQHTFSCADGAPKCPLQGASRADVGDAVETALEQLNRRYQPRLRFQKQRLLNGYRRFDPARGMEYTLDLLLEAVTQRGHRRALARRVSLLRPLSRVEILPMPYVTEATRVQLVLPLLVAEAAAAPAFLEAFAAGVLEPREHALLTLLLVYGPREGGRGAPDPFLGVKAAAAELERRYPGTRLAWLAVRAEAPSQVRLLDVVSKKHPVDTLFFLTTVWTRPGPEVLNRCRMNAISGWQAFFPVHFQEFSPALAPQRSPQGPPGAGPDPPSPPGADPARGAPAGGRFDRQASAEGCFYNADYLAARARLAGELAGQEEEEALEGLEVVDVFLRFSGLHLFRAVEPGLVQKFSVRDCSPRLSEELYHRCRLSNLEGLGGRAQLAMALFEQEQANST*