Sequence detailsbmy_12933 (Coding sequence)

Part of scaffold_793 (SequenceType object (1))

For more information consult the page for scaffold_793 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTGFENSTTRG00000002853 (Bottlenosed dolphin)

Gene Details

connective tissue growth factor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002676, Bottlenosed dolphin)

Protein Percentage 71.06%
cDNA percentage 70.96%
Ka/Ks Ratio 0.16451 (Ka = 0.0171, Ks = 0.1041)

CTGFENSBTAG00000006367 (Cow)

Gene Details

Connective tissue growth factor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008357, Cow)

Protein Percentage 90.54%
cDNA percentage 89.88%
Ka/Ks Ratio 0.12405 (Ka = 0.0576, Ks = 0.464)

CTGF (Minke Whale)

Gene Details

connective tissue growth factor

External Links

Gene match (Identifier: BACU014306, Minke Whale)

Protein Percentage 95.24%
cDNA percentage 94.99%
Ka/Ks Ratio 0.23915 (Ka = 0.0345, Ks = 0.1443)

Additional orthologs identified in other species via the OPTIC pipeline.

CTGF (Human)   Ctgf (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1110 bp    Location:495401..506082   Strand:+
Raw sequence 
>bmy_12933
ATGAGCAAGAAGAATCAACAGAGAGCAGTTAGAAATGATGAAAATGCCACAAAAGATTCATTTGGACAAAATCAGCTTTCATCATCTATATGTGAGAAATGGCTTAATGGTGAAATATTTCCAGACCCCGCCTCCGGCCAAGACTGCGGCGGCCGGTGCCAGTGCGCTGCCGGCCCGGCGCCGCGCTGCCCCGCCGGCGTCAGCCTGGTGCTGGACAGCTGCGGCTGCTGCCGCGTGTGCGCCAAGCAGCTGGGCGAGCTGTGCACCGAGCGCGACCCCTGCGACCCGCACAAGGGCCTCTTCTGCGACTTCGGCTCCCCGGCCAACCGCAAGATCGGCGTGTGCACCGCCAAAGATGGTGCCCCCTGCGTCTTCGGAGGGACGGTGTACCGGAGCGGAGAGTCCTTCCAGAGCAGCTGCAAATACCAGTGCACTTGCCTGGACGGGGCGGTGGGCTGTGTGCCCCTGTGCAGCATGGACGTCCGCCTGCCCAGCCCCGACTGCCCCTTCCCACGAAGGGTCAAGCTGCCCGGGAAATGCTGCGAGGAGTGGGTGTGTGACGAGCCCAAGGACCACACCGTGGTCGGCCCTGCCCTCGCTGCTTACCGACTGGAAGACACGTTTGGCCCAGACCCAACCATGATTCGAGCCAACTGCCTGGTCCAGACCACAGAGTGGAGTGCCTGTTCCAAGACCTGCGGGATGGGCATCTCCACCCGGGTTACCAATGACAACGCCTTCTGCAGGCTGGAGAAGCAGAGCCGCCTCTGCATGGTCAGGCCTTGTGAAGCTGACCTGGAAGAGAACATTAAGAAGGGCAAAAAGTGCATCCGGACCCCCAAAATCTCCAAGCCTGTCAAGTTTGAGCTTTCTGGCTGCACCAGCGTAAAGACATTCCGGGCTAAATTCTGCGGCGTGTGCACCGACGGGCGGTGCTGCACCCCACACAGAACCGCGACCCTTCCCGTGGAGTTCAAGTGTCCCGATGGCGAGGTCATGAAGAAGAGCATGATGTTCATCAAGACCTGTGCCTGCCATTACAACTGCCCCGGGGACAATGACATCTTTGAGTCGCTGTACTACAGGAAGATGTATGGAGACATGGCCTAA

Related Sequences

bmy_12933T0 SequenceType object (3)

Length: 370 aa      View alignments
>bmy_12933T0
MSKKNQQRAVRNDENATKDSFGQNQLSSSICEKWLNGEIFPDPASGQDCGGRCQCAAGPAPRCPAGVSLVLDSCGCCRVCAKQLGELCTERDPCDPHKGLFCDFGSPANRKIGVCTAKDGAPCVFGGTVYRSGESFQSSCKYQCTCLDGAVGCVPLCSMDVRLPSPDCPFPRRVKLPGKCCEEWVCDEPKDHTVVGPALAAYRLEDTFGPDPTMIRANCLVQTTEWSACSKTCGMGISTRVTNDNAFCRLEKQSRLCMVRPCEADLEENIKKGKKCIRTPKISKPVKFELSGCTSVKTFRAKFCGVCTDGRCCTPHRTATLPVEFKCPDGEVMKKSMMFIKTCACHYNCPGDNDIFESLYYRKMYGDMA*