Part of scaffold_798 (Scaffold)

For more information consult the page for scaffold_798 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VIP ENSTTRG00000004325 (Bottlenosed dolphin)

Gene Details

vasoactive intestinal peptide

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004061, Bottlenosed dolphin)

Protein Percentage 93.21%
cDNA percentage 95.06%
Ka/Ks Ratio 0.37854 (Ka = 0.0364, Ks = 0.0962)

VIP ENSBTAG00000013400 (Cow)

Gene Details

VIP peptides Intestinal peptide PHI-27 Vasoactive intestinal peptide

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017827, Cow)

Protein Percentage 93.21%
cDNA percentage 90.53%
Ka/Ks Ratio 0.11636 (Ka = 0.0378, Ks = 0.3244)

VIP  (Minke Whale)

Gene Details

vasoactive intestinal peptide

External Links

Gene match (Identifier: BACU011783, Minke Whale)

Protein Percentage 95.06%
cDNA percentage 96.5%
Ka/Ks Ratio 0.55241 (Ka = 0.0286, Ks = 0.0518)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 489 bp    Location:6920..558   Strand:-
>bmy_12939
ATGGAAACGAGAAGCAAGCCCCAGCTCCTCGTGTTCCTGACACTTTTCAGCGTGCTTTTCTCGCAGACMTTGGCATGGCCTCTTTTTGGAGCACCGTCTGCTCTAAGGGTGGGTGACAGAATACCTTTTGAAGGAGCAAATGAACCTGACCAAATTTCATTAAAAGCAGACACTGACGTTTTACAAAATGCATTAGCTGAAAATGACACACCTTATTATGATGTATCCAGAAATGTCAGACATGCTGATGGAGTTTTCACGAGTGACTACAGTAGACTCTTAAGTCAACTTTCTGCCAAAAAGTACCTTGAGTCCCTTATTGGAAAACGAATTAGCAATAGCATCTCAGAAGACCAGGGACCAATCAAACGCCACTCAGATGCAGTCTTCACTGACAACTATACCCGCCTTCGAAAACAAATGGCTGTAAAGAAATACTTGAACTCCATTCTAAATGGAAAGCGGAGAATTCTTGAAGGAAAACGATAA

Related Sequences

bmy_12939T0 Protein

Length: 163 aa      View alignments
>bmy_12939T0
METRSKPQLLVFLTLFSVLFSQTLAWPLFGAPSALRVGDRIPFEGANEPDQISLKADTDVLQNALAENDTPYYDVSRNVRHADGVFTSDYSRLLSQLSAKKYLESLIGKRISNSISEDQGPIKRHSDAVFTDNYTRLRKQMAVKKYLNSILNGKRRILEGKR*