Sequence detailsbmy_12952 (Coding sequence)

Part of scaffold_830 (SequenceType object (1))

For more information consult the page for scaffold_830 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000006580 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006223, Bottlenosed dolphin)

Protein Percentage 86.88%
cDNA percentage 90.05%
Ka/Ks Ratio 0.68703 (Ka = 0.0979, Ks = 0.1426)

BT.24893ENSBTAG00000003137 (Cow)

Gene Details

lipid phosphate phosphatase-related protein type 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004081, Cow)

Protein Percentage 85.97%
cDNA percentage 85.82%
Ka/Ks Ratio 0.26956 (Ka = 0.0995, Ks = 0.3693)

Additional orthologs identified in other species via the OPTIC pipeline.

LPPR1 (Human)   E130309F12Rik (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 666 bp    Location:402977..412024   Strand:+
Raw sequence 
>bmy_12952
ATGGACTCTCACCGCTGTTTTTCTCTCAGGGACAAAACCAGTCGATGGGGTATGTCATCTTTCCTAATTATTTTAAATCTCCTCATAGGGGTATTTGCTTTTGGGCTTTTTGCTACTGACATTTTTGTAAACGCCGGACAAGTGGTCACGGGGCACCTGACGCCGTACTTCCTGACGGTGTGCAAGCCCAACTACACCAGCGCAGACTGCCCGGCGCACCACCAGTTCATCAACAACGGGAACGTCTGTACTGGGGACCTGGAAGTGATAGAGAAGGCTAGGAGGTCCTTTCCCTCCAAACATGCTGCTCTGAGCATTTACTCCGCCTTATACGCCACGATGTACATCACAAGCACAATCAAGACGAAAAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGGACCCTCTGCACAGCCTTCCTGATGGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCCGATGTGATCGCGGGCTTCATCCTGGGCACTGCTGTAGCCCTGTTTCTGGGAATGTGTGTGGTCCATAACTTTAAAGGAACACAAGGATCTCCTTCAAAACCCAAACCCGAGGACCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGCCAGTTAATGCAGGTTGA

Related Sequences

bmy_12952T0 SequenceType object (3)

Length: 222 aa      View alignments
>bmy_12952T0
MDSHRCFSLRDKTSRWGMSSFLIILNLLIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCPAHHQFINNGNVCTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLMGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQPVNAG*