Sequence details bmy_12970 (Coding sequence)

Part of scaffold_802 (Scaffold)

For more information consult the page for scaffold_802 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSD11B1 ENSTTRG00000001115 (Bottlenosed dolphin)

Gene Details

hydroxysteroid (11-beta) dehydrogenase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001049, Bottlenosed dolphin)

Protein Percentage 98.28%
cDNA percentage 97.32%
Ka/Ks Ratio 0.08703 (Ka = 0.0079, Ks = 0.0904)

HSD11B1 ENSBTAG00000015086 (Cow)

Gene Details

corticosteroid 11-beta-dehydrogenase isozyme 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020078, Cow)

Protein Percentage 86.63%
cDNA percentage 87.98%
Ka/Ks Ratio 0.21211 (Ka = 0.0756, Ks = 0.3562)

Additional orthologs identified in other species via the OPTIC pipeline.

HSD11B1 (Human)   Hsd11b1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 522 bp    Location:643410..641073   Strand:-
Raw sequence 
>bmy_12970
ATGGCTTTTATGAAAAAATATCTCCTCCCCATTCTGGGGATCTTCTTGGCCTACTACTACTATTCTGCGAAGGAGGAATTCAGACCAGAGATGCTTCGAGGAAAAAGAGTGATTGTCACAGGGGCCAGCAAGGGGATTGGAAGAGAGATGGCCTATCATCTGGCGAGAATGGGAGCCCATGTGGTAGTGACAGCGAGGTCAGAAGAAGCTCTAAAGAAGGTGGTATCCCACTGCCTGGAGCTCGGTGCATCCTCGGCACACTACGTTGCTGGCACCATGGAGAACATGACCTTCGCAGAGGAATTTGTTGCCAAAGCTGGAAAACTCATGGGGGGACTAGACATGCTTATTCTCAACCACATCACCAACACCAACAATCCTATGACTGTATTTATTGATGACATTGACCAAGTGCGCAAAAACATGGAGGTCAACTTCCTGAGTTATGTGGTCCTGAGCGGGGCCGCCATGCCCATGCTGAAGCAGAGCAATGGGAGCATTGTGGTTGTCTCCTCAATAGCT

Related Sequences

bmy_12970T0 Protein

Length: 174 aa      View alignments
>bmy_12970T0
MAFMKKYLLPILGIFLAYYYYSAKEEFRPEMLRGKRVIVTGASKGIGREMAYHLARMGAHVVVTARSEEALKKVVSHCLELGASSAHYVAGTMENMTFAEEFVAKAGKLMGGLDMLILNHITNTNNPMTVFIDDIDQVRKNMEVNFLSYVVLSGAAMPMLKQSNGSIVVVSSIA