Sequence detailsbmy_12972 (Coding sequence)

Part of scaffold_802 (SequenceType object (1))

For more information consult the page for scaffold_802 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LAMB3ENSTTRG00000017004 (Bottlenosed dolphin)

Gene Details

laminin, beta 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016121, Bottlenosed dolphin)

Protein Percentage 95.13%
cDNA percentage 97.17%
Ka/Ks Ratio 0.3879 (Ka = 0.0218, Ks = 0.0563)

LAMB3ENSBTAG00000016542 (Cow)

Gene Details

laminin subunit beta-3 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022005, Cow)

Protein Percentage 88.64%
cDNA percentage 90.08%
Ka/Ks Ratio 0.152 (Ka = 0.0555, Ks = 0.3648)

LAMB3 (Minke Whale)

Gene Details

laminin, beta 3

External Links

Gene match (Identifier: BACU000013, Minke Whale)

Protein Percentage 97.83%
cDNA percentage 98.37%
Ka/Ks Ratio 0.22756 (Ka = 0.0096, Ks = 0.0421)

Additional orthologs identified in other species via the OPTIC pipeline.

LAMB3 (Human)   Lamb3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3330 bp    Location:708095..734947   Strand:+
Raw sequence 
>bmy_12972
ATGAAATGCTGCAAGTGTGACTCCAGGTTGCCTCACAATTACAACAGTCACCGAGTGGAGAATGTGGTCTCGTCCTCGGGCCCCATGCGCTGGTGGCAGTCACAGAACGATGTGAGCCCTGTCTCTCTGCAGCTGGACCTAGACAGGAAATTCCAGCTTCAAGACCTCATGATGGATTTTAAGGGGCCCATGCCTGCTGGCATGCTGATCGAGCGCTCCTCGGACTTCGGCAAGACCTGGCAGGTGTACAAATACCTAGCTGCCGACTGCACGTCTGCCTTCCCCCGGGTCCGCCAGGGCCAGCCTCAGAGCTGGCAGGATGCTCGGTGCCAGCCTCTGCCCCAGAGGCCTAACAGGCGCCTGGATGGGGCCAAGGTCCAACTTAACCTTATGGATTTAGCCTCTGGGATCCCAGCAACTCAAAGTCAAAAAATTCAAGAGCTGGGGGAGATCACAAACTTGAGAGTCAACTTCACCAGGCTGGCCCCTGTGCCCCAGAGGGGCTATCACCCTCCCAGCGCTTACTATGCTGTTTCCCAGCTGCGTCTGCAGGGGAGCTGCTTCTGTCACGGCCATGCTGACCGCTGTGCCCCCAATTCCAGAGCCCCTGCCGGCCCCTCCACCACTGTGCAGGTCCATGAGGTCTGCGTCTGCCAGCACAACACCGCCGGCACCAACTGTGAACGCTGTGCACCCTTCTACAACAACAGGCCCTGGAAACCCGCAGATGACCAGGACCCCCATGAATGCCAAAGGTGTGACTGCAACGGACACTCAGAGACATGTCACTTCGACCCAGCCGTGTTTGCCGCCAGCCAGGGGGCACATGGAGGTGTGTGTGACAACTGCCAGCACCACACCGAGGGCAAGAACTGTGAACGATGTCAGCTGCACTATTTCCGGAACCGGCGTCCTGGTGCTCCCATTCAGGAGACCTGCCTCCCCTGCGAGTGTGATCCAGATGGGGCAGTGCCAGGAGCGCCCTGTGACCCAGTGACCGGGCAATGTGTGTGCAAGGAGCAAGTGCAGGGGGAACGCTGTGACCTGTGCAAGCCGGGATTTACAGGACTCACCTATGCCAACCCGCAGGGCTGCCACCGTTGTGACTGCAGCGTCCTGGGTACCCGGCGGGACATGCCGTGTGATGAGGAGAGTGGACGCTGCCTGTGTCTGCCCCACGTGGTGGGCCCCAAATGTGACCAGTGCGCTCGCTACCACTGGAAGCTGGCCAGCGGCCGGGGCTGCGAGCCATGTGCCTGCGACCTGCACAACTCCCTCAGCCCCCAGTGCCACCAGTTCACAGGGCAGTGCCCCTGTCAGGAAGGGTTTGGTGGCCTGACCTGCAGCACTGCAGCCGTCCGCCAGTGTCCTGACAGGACCTACGGAGATGCAGCTATGGGATGCCGAGCCTGTGACTGTGACTTCCGGGGAACGGAGGGACCAGGCTGCGACAAGGTCTCGGGCCGCTGTCTCTGCCGCCCTGGCTCGACCGGGCCACGCTGCGACCAGTGCCAGCGAGGCTACTGTGACCGCTACCCGGTGTGTGTGGCCTGCCACCCCTGCTTCCAGACCTACGACGCCGGCCTCCGGGAGCGGGCCCTCCGCCTCAGCAGCCTCCGCAATGCCACCACCAGCCTGTGGCCCGGGCCGGGCCTGGAGGACCGCGGCCTGGCATCCCGGATGCTGGACACAAAGAACAAGCTGGAGCAGATCCAAGCCATCCTCGGCGGCGCCTCGGTCACGGAGCAGGAGGTGGCCCAGGTGGCCAATGCCATCATCTCCATCAGGCAGACTCTCCAGGGCCTGCAGGTGGATCTGCCCCTAGAGGAGGAGACCTTGTCCCTCCCGGGAGACCTGGAGAATCTGGACAGAAGCTTCAATCGCCTCCTCGTTATGTATCAGAGCAAGAGGGAGCAGTTTGAAAAAATAAGCAGTGCCGATCCTTCAGGAGCCTTCCGGATGCTGACCGCGGCCCACCAGCGGTCGTCCCAGGCTGCTCAGCAGGTCGCGGACAGCTCCCGCTGGCTGCTCCAGCTCAGGGACAGCCGGAGAGAGGCGGAGAGGCTGGAGCAGAAGCCGGGAGGAGGAGGAGGAGCCAGTGGCCCACAGCTCGCGGCCCTGAGGCTGGAGATGGCTTCCTTGCCTGATCTGACACCCACCGTCAACAAGCTCTGTGGGGGCTCCAGGGAGATGGCTTGCACCCCGGGAGCATGCCCTGGGGAGCTGTGTCCCCGAGACAACGGCACGGCCTGTGGCTCCCACTGCAGTGGTGCTCTCCCCAGGGCAGGTGGGGCCTTCCGGATGGCAGGGCAGGTGGCCGAGCAGCTGCGGGGCTTCAACGCCCAGCTCCAGCAGACCAGGCAGATGATCAGGGCAGCCGAGGAAGCCACCTCGCAGGTGCAGTCGGATGCTCAGCGCCTGGAGATGCAGGTGAGCACCAGCCGCTCCCAGATGGAGGAGGACGTCACACGCACGCGGCTCCTCATCCAGCAGGTCCGGGACTTCCTCTCAGACCCTGACACCGACACAGCCACCATCCAGGAGGTCAGTGAGGCCGTGCTGGCCCTGTGGCTGCCCACAGACTCTGCCACAGTCCTGCAGAAGATGAATGAGATCCAGGCCATCGCAGCCAGGCTCCCCAACGTGGACCTGGTGCTTTCTCAGACCAAGCAGGACATCGCTCGGGCTCGCAGGCTCCAGGCTGAGGCTGAGCAGGCCAGGAGCCGAGCCCACACAGTGGAGGGCCAGGTGGAGGATGTGCTGGGGAACCTGCGACAGGGCACGCTGGCACTGCAGGAGGCCCGGGACACCATGCAAGGCACCCGCCGCTCCCTTCAGCTTATCCAAGACAGGGTTGCTGAGGTTCAGCAGGTGCTGGGGCCAGCGGAAAGACTGGTGACCGGCATGATGGAGCAGCTGGGTGGCTTCCGAGCACGGATGGAGGAGCTCAGCCTCCGGGCCAGGCAGCAGCGGGCGCAGGCAGCCCAGGCCCAGCAGCTGGCAGAGGAAGCCAGCGAGCAGGCACTGAGTGCCCAGGAGGGATTTGAGAGAATAAAGCAAAAATATGCTGAGTTGAAGGACCGGCTGGGTCAGAGCCCCATGCTGGGAGAGCAGGGCAGCCGGATCCTGAGCATCAAGACGGAGGCGGAGGAACTGTTTGGGGAAACCATGGAGATGATGGACAGGATGAAAGACATGGAGTCGGAGCTGCTTCGGGGGAGCCAGGCCATCATGCTTCGCTCGGCGGACCTGACGGGGCTGGAGAAGCACGTGGAGCAGATCCGCAACCATATCAATGGGCGCGTGCTCTACTACGCCACCTGCAAGTGA

Related Sequences

bmy_12972T0 SequenceType object (3)

Length: 1110 aa      View alignments
>bmy_12972T0
MKCCKCDSRLPHNYNSHRVENVVSSSGPMRWWQSQNDVSPVSLQLDLDRKFQLQDLMMDFKGPMPAGMLIERSSDFGKTWQVYKYLAADCTSAFPRVRQGQPQSWQDARCQPLPQRPNRRLDGAKVQLNLMDLASGIPATQSQKIQELGEITNLRVNFTRLAPVPQRGYHPPSAYYAVSQLRLQGSCFCHGHADRCAPNSRAPAGPSTTVQVHEVCVCQHNTAGTNCERCAPFYNNRPWKPADDQDPHECQRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCQHHTEGKNCERCQLHYFRNRRPGAPIQETCLPCECDPDGAVPGAPCDPVTGQCVCKEQVQGERCDLCKPGFTGLTYANPQGCHRCDCSVLGTRRDMPCDEESGRCLCLPHVVGPKCDQCARYHWKLASGRGCEPCACDLHNSLSPQCHQFTGQCPCQEGFGGLTCSTAAVRQCPDRTYGDAAMGCRACDCDFRGTEGPGCDKVSGRCLCRPGSTGPRCDQCQRGYCDRYPVCVACHPCFQTYDAGLRERALRLSSLRNATTSLWPGPGLEDRGLASRMLDTKNKLEQIQAILGGASVTEQEVAQVANAIISIRQTLQGLQVDLPLEEETLSLPGDLENLDRSFNRLLVMYQSKREQFEKISSADPSGAFRMLTAAHQRSSQAAQQVADSSRWLLQLRDSRREAERLEQKPGGGGGASGPQLAALRLEMASLPDLTPTVNKLCGGSREMACTPGACPGELCPRDNGTACGSHCSGALPRAGGAFRMAGQVAEQLRGFNAQLQQTRQMIRAAEEATSQVQSDAQRLEMQVSTSRSQMEEDVTRTRLLIQQVRDFLSDPDTDTATIQEVSEAVLALWLPTDSATVLQKMNEIQAIAARLPNVDLVLSQTKQDIARARRLQAEAEQARSRAHTVEGQVEDVLGNLRQGTLALQEARDTMQGTRRSLQLIQDRVAEVQQVLGPAERLVTGMMEQLGGFRARMEELSLRARQQRAQAAQAQQLAEEASEQALSAQEGFERIKQKYAELKDRLGQSPMLGEQGSRILSIKTEAEELFGETMEMMDRMKDMESELLRGSQAIMLRSADLTGLEKHVEQIRNHINGRVLYYATCK*