Sequence detailsbmy_12998 (Coding sequence)

Part of scaffold_810 (SequenceType object (1))

For more information consult the page for scaffold_810 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARNTL2ENSTTRG00000012339 (Bottlenosed dolphin)

Gene Details

aryl hydrocarbon receptor nuclear translocator-like 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011707, Bottlenosed dolphin)

Protein Percentage 89.32%
cDNA percentage 90.63%
Ka/Ks Ratio 0.34914 (Ka = 0.033, Ks = 0.0944)

ARNTL2ENSBTAG00000011804 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040847, Cow)

Protein Percentage 88.91%
cDNA percentage 91.67%
Ka/Ks Ratio 0.27951 (Ka = 0.0582, Ks = 0.2081)

ARNTL2 (Minke Whale)

Gene Details

aryl hydrocarbon receptor nuclear translocator-like 2

External Links

Gene match (Identifier: BACU006115, Minke Whale)

Protein Percentage 85.33%
cDNA percentage 89.16%
Ka/Ks Ratio 0.66982 (Ka = 0.1082, Ks = 0.1616)

Additional orthologs identified in other species via the OPTIC pipeline.

ARNTL2 (Human)   Arntl2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1386 bp    Location:539229..595998   Strand:+
Raw sequence 
>bmy_12998
ATGGTTTCCAGTCATCTGAGCCCATGGACAAAACCAGCAACTATTGGATCCTTCAGCCCACATGTGACAGAGTTTCCAAGAAAACGAAAAGGGAGTGATTCAGACCCATCCCAAATGGAAGATGGTGAACAACAAGTAAAAATGAAGTCCTTCAGGTATACTGAACTGTTGAGAGAGTACACGACTGCAGAAGGCTTCCTATTTGTGGTTGGATGTGAAAGAGGAAAAATTCTCTTCATTTCTAAGTCAGTCTCCAAAATACTTAATTATGATCAGGCTAGTTTGACTGGACAAAGCTTATTTGACTTCTTACATCCAAAAGATGTTGCCAAGGTAAAGGAACAACTTTCTTCCTCTGACATTTCACCAAGAGAGAAGCTAATAGATGCCGAAAATCATAGAAAATTCTGTACTATCCACTGCACTGGTTACTTGAGAAACTGGCCTCCAAATATTGTTGGAATGGAAGAAGAAATGGACAATAAGAAAGACAGTAGTAATTTTACCTGCCTTGTTGCCATTGGAAGATTACATCCATATATTGTCCCACAGAACAGTGGAGAGATTAAAGTGAAACCAACAGAATTTATTACCCGTTTTGCAGTGAATGGACAATTTGTCTATGTTGATCAAAGGGCAACAGCAATTTTAGGATATCTGCCTCAGGAACTTTTGGGAACTTCTTGTTATGAATATTTTCATCAAGATGACCATAGTAATTTGACTGACAAGCACAAAGCAGTTCTGCAGAGTAAAGAGAAAATATTTACAGATTCATACAAATTCAGAGCAAAAGATGGCTCTTTCGTAACTTTAAAAAGCCAGTGGTTTAGTTTCACAAATCCTTGGACCAAAGAACTGGAATATATTGTGTCTGTCAACACTTTAGTTTTGGGACATAGTGATACTGGAGAAACATCATTGCTTCCTTGCAGCTCTCAATCATCAGAAGGATCCTCTAGACAGTCTTGCAATAGTGTGCCTGGAATGTCTACGGGAACGGTACTTGGTGCTGGTAGTATCGGAACAGATATTGCAAGTGAACTTCTGGACTTACAAAGGTTACAGTCTTCTTCATCCCTTGATGATTCAAGCCCAACAGATTTATTGAAAGATACTCACACTATAAACTGCAGGAATATGTCAGATAAGGAGCTGACTACACTAAGTCCTTCTGAAATAGGGGAGCTACAGGCTACAAAGCAAAACCAAAGTGCTGCTACTCCCCAGAGTCACGAACCACTCCTTGGAGAAGGTGCCCAGCTGGATTTTGATGCCCTCTGTGACAATGACGACACAGCCATGGCTGCCTTCATGAATTACTTAGAAGCAGAGGGGGGACTGGGAGACCCTGGAGACTTCAGTGACATCCACTGGACACTCTAG

Related Sequences

bmy_12998T0 SequenceType object (3)

Length: 462 aa      View alignments
>bmy_12998T0
MVSSHLSPWTKPATIGSFSPHVTEFPRKRKGSDSDPSQMEDGEQQVKMKSFRYTELLREYTTAEGFLFVVGCERGKILFISKSVSKILNYDQASLTGQSLFDFLHPKDVAKVKEQLSSSDISPREKLIDAENHRKFCTIHCTGYLRNWPPNIVGMEEEMDNKKDSSNFTCLVAIGRLHPYIVPQNSGEIKVKPTEFITRFAVNGQFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAVLQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVLGHSDTGETSLLPCSSQSSEGSSRQSCNSVPGMSTGTVLGAGSIGTDIASELLDLQRLQSSSSLDDSSPTDLLKDTHTINCRNMSDKELTTLSPSEIGELQATKQNQSAATPQSHEPLLGEGAQLDFDALCDNDDTAMAAFMNYLEAEGGLGDPGDFSDIHWTL*