Sequence details bmy_13005 (Coding sequence)

Part of scaffold_801 (Scaffold)

For more information consult the page for scaffold_801 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDH9 ENSTTRG00000006959 (Bottlenosed dolphin)

Gene Details

protocadherin 9

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006585, Bottlenosed dolphin)

Protein Percentage 93.1%
cDNA percentage 92.68%
Ka/Ks Ratio 0.28054 (Ka = 0.0143, Ks = 0.0511)

PCDH9 ENSBTAG00000019340 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025758, Cow)

Protein Percentage 99.71%
cDNA percentage 97.25%
Ka/Ks Ratio 0.01378 (Ka = 0.0014, Ks = 0.0988)

Additional orthologs identified in other species via the OPTIC pipeline.

PCDH9 (Human)   Pcdh9 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3099 bp    Location:409892..414951   Strand:+
Raw sequence 
>bmy_13005
ATGGACCTGAGGGATTTTTACCTGTTGGCTGCTCTGATTGCCTGTTTAAGGCTGGATTCCGCAATAGCTCAAGAACTTATTTACACTATTAGAGAGGAATTGCCTGAAAATGTGCCCATAGGAAAYATACCAAAGGATCTGAACATTTCTCACATCAATGCTGCCACAGGGACCAGCGCCAGCCTTGTCTACAGACTGGTTTCTAAAGCTGGGGATGCCCCTTTGGTGAAAGTATCCAGTAGCACTGGCGAAATTTTCACAACCTCCAATAGAATAGACAGAGAAAAACTCTGTGCTGGAGCCTCTTACGATGAGGAGAATGAGTGTTTCTTTGAACTTGAGGTGGTGATCCTCCCCAATGATTTTTTCAGGCTGATCAAAATTAAAATAATTGTCAAGGATACCAATGATAATGCCCCCATGTTTCCATCTCCTGTCATCAATATTTCCATCCCAGAAAACACTTTGATCAACAGCCGCTTTCCAATTCCATCAGCAACAGATCCTGACACAGGCTTCAATGGTGTACAGCATTATGAATTGTTAAATGGGCAGAGTGTTTTTGGACTGGATATCGTGGAAACTCCGGAAGGAGAGAAGTGGCCGCAATTGATTGTTCAGCAAAACTTGGACAGAGAACAGAAAGATACCTATGTGATGAAAATCAAAGTAGAGGATGGAGGCACTCCACAGAAATCCAGCACAGCCATACTGCAGGTCACAGTAAGTGATGTAAATGACAACAGGCCAGTGTTTAAAGAGGGTCAAGTGGAGGTGCATATTCCAGAGAATGCTCCCGTAGGCACCTCTGTAATTCAGCTCCATGCCACTGATGCAGATATAGGCAGTAATGCTGAAATCCGGTACATTTTTGGTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTTTAAATAATACTACTGGGTTGATTACAGTTCAGAGGTCTTTAGATCGAGAGGAGACAGCCATTCACAAAGTGACAGTGCTGGCTAGTGATGGCAGCTCCACTCCCGCTCGAGCAACGGTTACCATCAATGTCACTGATGTAAATGATAACCCTCCAAACATAGACCTCAGGTACATTATAAGTCCCATCAATGGCACAGTGTATTTGTCTGAGAAAGATCCTGTCAATACAAAGATTGCCCTAATTACAGTTTCAGATAAGGACACAGATGTGAATGGCAAAGTGATCTGTTTTATTGAAAGAGAGGTCCCGTTTCATTTGAAGGCAGTATACGACAACCAATATTTGTTAGAGACRTCCTCTTTGTTGGACTATGAGGGCACCAAAGAATTCAGCTTTAAAATTGTTGCCTCTGATTCTGGGAAGCCCAGTTTAAATCAGACTGCTCTGGTAAGGGTTAAGCTTGAGGACGAAAATGACAACCCACCAATTTTCAACCAGCCTGTAATTGAGCTGTCAGTTTCTGAAAACAACCGTCGTGGGYTGTACTTAACAACTATTAGTGCCACAGATGAAGACAGTGGGAAAAATGCAGATATTGTTTATCAGCTTGGACCGAATGCCTCCTTCTTTGATCTGGACCGAAAGACAGGAGTTCTGACAGCCTCCAGAGTCTTTGACAGAGAAGAACAAGAAAGATTCATTTTTACAGTAACTGCCAGGGACAATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATAGTTACTGTTCTGGATGAGAATGACAATAGCCCCAAGTTTACTCATAATCATTTTCAATTTTTTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTGGGGGTAATCACAGTGACAGATGCAGATGCTGGAGAGAATAAAGCTGTGACTCTTTCCATTCTAAATGACAATGATAATTTTGTGTTGGATCCCTATTCTGGAGTCATAAAGTCAAATGTCTCATTTGACAGAGAGCAGCAGAGTTCCTACACTTTCGATGTCAAAGCCACTGATGGGGGACAACCACCCCGTTCCTCTACTGCAAAAGTAACTATAAATGTCATGGATGTCAATGACAATAGTCCGGTTGTCATTTCGCCACCTTCTAATACTTCTTTTAAGTTGGTGCCTCTCTCAGCCATTCCTGGCTCCGTGATAGCAGAAGTTTTTGCCGTGGATATTGACACTGGGATGAATGCTGAACTTAAGTATACAATTGTGAGTGGGAACAACAAAGGCCTGTTTCGGATTGATCCAGTAACAGGTAACATCACTCTGGAAGAAAAACCAGCACCTACTGATGTGGGCTTGCACCGATTGGTGGTCAACATAAGTGACCTGGGATACCCTAAGTCTCTGCACACACTTGTGCTTGTTTTTCTTTATGTTAATGACACTGCTGGCAATGCCTCCTATATCTATGACTTGATTCGCAGGACTATGGAGACYCCATTGGACAGGAACATAGGCGATAGCAGCCAACCCTATCAAAACGAGGACTATCTCACCATCATGATCGCCATTGTCGCAGGTGCCATGGTGGTCATCGTCGTGATCTTCGTCACCGTTCTGGTGCGCTGTCGCCATGCATCAAGATTCAAAGCAGCTCAGAGGAGTAAGCAAGGTGCTGAATGGATGTCCCCAAACCAGGAGAACAAACAAAACAAGAAAAAGAAAAGGAAGAAAAGAAAGTCTCCCAAGAGCTCTCTTTTGAACTTTGTTACCATCGAAGAGTCCAAACCCGATGATGCAGTTCACGAACCCATCAATGGGACAATAAGCCTGCCGGCTGAGCTGGAGGAGCAAAGCATAGGTAGATTTGACTGGGGTCCGGCACCTCCAACCACCTTCAAGCCGAACAGCCCTGACCTGGCCAAGCACTACAAATCCGCTTCTCCACAGCCCGCTTTCCATCTTAAACCAGACACTCCGGTTTCCGTGAAAAAGCATCACGTGATCCAGGAGCTCCCGTTGGACAACACCTTTGTCGGGGGTTGTGACACCCTTTCCAAACGCTCTTCCACTAGTTCAGATCACTTCAGTGCCTCAGAGTGCAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCTTACACACCAGACAGGTAAATGAGCACTTTTACTGGTCTATAAGTACTGCATACAAGTGCCCAGTCAACCAGTATTAA

Related Sequences

bmy_13005T0 Protein

Length: 1033 aa      View alignments
>bmy_13005T0
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYDEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVIAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWSISTAYKCPVNQY*