Sequence detailsbmy_13027 (Coding sequence)

Part of scaffold_826 (SequenceType object (1))

For more information consult the page for scaffold_826 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MEP1BENSTTRG00000010942 (Bottlenosed dolphin)

Gene Details

meprin A, beta

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010370, Bottlenosed dolphin)

Protein Percentage 91.58%
cDNA percentage 94.74%
Ka/Ks Ratio 0.95739 (Ka = 0.0317, Ks = 0.0331)

BT.29198ENSBTAG00000020391 (Cow)

Gene Details

meprin A subunit beta precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000045584, Cow)

Protein Percentage 84.94%
cDNA percentage 89.91%
Ka/Ks Ratio 0.41292 (Ka = 0.0825, Ks = 0.1997)

MEP1B (Minke Whale)

Gene Details

meprin A, beta

External Links

Gene match (Identifier: BACU001577, Minke Whale)

Protein Percentage 97.89%
cDNA percentage 98.95%
Ka/Ks Ratio 0.97723 (Ka = 0.0102, Ks = 0.0104)

Additional orthologs identified in other species via the OPTIC pipeline.

MEP1B (Human)   Mep1b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1995 bp    Location:408660..429751   Strand:+
Raw sequence 
>bmy_13027
GTAGATGGTGGAATTGACCGGGATGTATTTGATATCAATGAAGATTTGGGACTGGATCTTTTTGAGGGAGACATCAGACTTGATGGGGTACAAGAAAGAAATTCCATCGTTGGAGAAAGATATAGATGGCCTCATACTATTCCATATGTTCTAGACGATAGCTTGGAAATGAATGCCAGGGGAGTTATCCTCAATGCATTTGAACGCTATCGCCTAAAAACATGCATTGAYTTCAAGCCTTGGTCTGGAGAACCCAACTATATATCAGTGTTCAAGGGCAATGGCTGCTGGTCTTCAGTGGGAAATAGGCGCATTGGGAGGCAAGAACTCTCCATCGGAAAGGGCTGTGACAAAATAGCAACAGTTCAACATGAGTTTCTCCACGCACTGGGATTCTGGCATGAACAGTCTCGGTCTGATCGGGATGACTATGTCAGCATAATTTGGGACAGAATTATTTCAGGCAAAGAGAAAAATTTTAAATCCTATGATGACCGGAAAGCAGACTCCCTGAACGTTCCCTATGATTACAGCTCAGTGATGCACTACAGTAAAACTGCATTCCGGAATGGATCGGAACCAACAATTGTGACAAGGATCCCAGACTTCATGGATGTGATTGGCCAACGAATGGATTTCAGTGACTCTGATCTCTTAAAGTTGAATCAACTGTATAACTGCTCCTCTTCCTTGAGCTTTATGGAGTCGTGCGATTTTGAACTGGAAAATGTGTGTGGTATGATTCAAAGTTCAGAAGATAGTGCTGACTGGCAACGGGTCTCCCAGGTTCCCGAGGGGCCAGAGAGTGATCACTCCAACATGGGCCGGTGCAAAGGTTCTGGTTTCTTCATGCATTTCAACAGTAGCTCTGTAAATGAGGGGGCCACAGCAATGCTGGGAAGTAGAATACTATACCCTAAACGAGGATTTCAGTGCTTGCAATTTTTTTTATATAACAGTGGAAGTGAATATGACCAACTGAACATCTATATCAGGGAGTATTCTGCAGCCAGTGTGAACAGGACTCTGACCCTTGTGGAAGAAATAAAAGATATACCCATTGGGAGCTGGCAACTTTACCACGTAACACTGAAAGTGAGCAACAAATTTAGAGTGGTATTTGGAGGGGTCAGAGGCGCTGGTGCCTCACGGGGTGGCCTGTCTATTGATGACATCAATCTTTCAGAAACACAGTGCCCTCATCATGTCTGGCATATAAGGAATTTCACACAGCTCATTGGCAGCCCCAGTGGATCTGTCTTCAGTCCTTCATTTTATTCTTCTAAAGGCTATGCCTTTCAGATTTGCTTGAATCTAAGTAGTTTGCCTAATGTAGGAATGTATTTCCACTTGATCTCTGGAGCCAATGATGATCAATTAGAGTGGCCATGTCCTTGGCAACAAGTCACGATGACCATCTTGGATCAAAATCCTGACATTCGACAGCGTATGTCCAACAAGCGGAGTATAACTACAGACCCATTTATGACCACCGGTAATGGAACCTATTTTTGGGACAGGCCTTCCAAAGTGGGAACACCAGTTTTTTTCCCTAATGGAACTCAGTTTCAAAGAGGTAGTGGCTATGGAAACAGTGTCTTTATGACCCATGAGAGGCTGAAAAGCAGAGATTTTATAAAAGGAGATGATGTTTATATCCTCCTGACAGTGGAAGACATATCCCACCTTAATACTACACAAAATGAGCCAATCCCGACCTTGGACATCAATGACCTTTGCACAGGCTTTAAATGTGAGAATGATGGCGTTTGCGTTCTCCACCATGGCAAAGCTGAGTGCCGGTGTCCGTCAGGGGAAGACTGGTGGTACATGGGAGAAAGGTGTGAAAAGAGAGGCTCAACTCGAGACACCATTGTGATTGCCGCGTCTTCCACTGTTGCTGTGTTTGCCCTGATGCTGATCATCACCCTCGTCAGTGTCTACTGTACCAGGAAAAAGTATCATAAAGAGACAGGTTCAAATATGACTCTGGAA

Related Sequences

bmy_13027T0 SequenceType object (3)

Length: 665 aa      View alignments
>bmy_13027T0
VDGGIDRDVFDINEDLGLDLFEGDIRLDGVQERNSIVGERYRWPHTIPYVLDDSLEMNARGVILNAFERYRLKTCIDFKPWSGEPNYISVFKGNGCWSSVGNRRIGRQELSIGKGCDKIATVQHEFLHALGFWHEQSRSDRDDYVSIIWDRIISGKEKNFKSYDDRKADSLNVPYDYSSVMHYSKTAFRNGSEPTIVTRIPDFMDVIGQRMDFSDSDLLKLNQLYNCSSSLSFMESCDFELENVCGMIQSSEDSADWQRVSQVPEGPESDHSNMGRCKGSGFFMHFNSSSVNEGATAMLGSRILYPKRGFQCLQFFLYNSGSEYDQLNIYIREYSAASVNRTLTLVEEIKDIPIGSWQLYHVTLKVSNKFRVVFGGVRGAGASRGGLSIDDINLSETQCPHHVWHIRNFTQLIGSPSGSVFSPSFYSSKGYAFQICLNLSSLPNVGMYFHLISGANDDQLEWPCPWQQVTMTILDQNPDIRQRMSNKRSITTDPFMTTGNGTYFWDRPSKVGTPVFFPNGTQFQRGSGYGNSVFMTHERLKSRDFIKGDDVYILLTVEDISHLNTTQNEPIPTLDINDLCTGFKCENDGVCVLHHGKAECRCPSGEDWWYMGERCEKRGSTRDTIVIAASSTVAVFALMLIITLVSVYCTRKKYHKETGSNMTLE