Sequence details bmy_13037 (Coding sequence)

Part of scaffold_816 (Scaffold)

For more information consult the page for scaffold_816 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAPPC11 ENSTTRG00000006629 (Bottlenosed dolphin)

Gene Details

trafficking protein particle complex 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006292, Bottlenosed dolphin)

Protein Percentage 92.67%
cDNA percentage 92.58%
Ka/Ks Ratio 0.22234 (Ka = 0.0131, Ks = 0.0591)

BT.19916 ENSBTAG00000007422 (Cow)

Gene Details

trafficking protein particle complex subunit 11

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009769, Cow)

Protein Percentage 96.56%
cDNA percentage 92.7%
Ka/Ks Ratio 0.07137 (Ka = 0.018, Ks = 0.2518)

TRAPPC11  (Minke Whale)

Gene Details

trafficking protein particle complex 11

External Links

Gene match (Identifier: BACU007174, Minke Whale)

Protein Percentage 98.05%
cDNA percentage 97.85%
Ka/Ks Ratio 0.30237 (Ka = 0.013, Ks = 0.0432)

Additional orthologs identified in other species via the OPTIC pipeline.

TRAPPC11 (Human)   Trappc11 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3402 bp    Location:446860..489685   Strand:+
Raw sequence 
>bmy_13037
ATGAGCCCCACACAATGGGACTTCCCTGTGGAATTATGTTGTCGGCCTATGGCTTTTGTTACTCTCACGGGCCTGGATGTGGTTTATAATGCTGTCCATCGAGCTGTCTGGGATGCTTTCTGTGCCAATCGGAGGGCTGATCGGGTACCGATTTCTTTCAAGGTGCTCCCAGGTGACCATGAGTATCCCAAATGTAGACCCAAGAGAACTTCGTATGAATGGTACATTCCCAAAGGGATCCTGAAGACAGGCTGGATGAATAAGCATCTGAATCTGGTGCCAGCCCTGGTGGTCGTGTTCTACGAACTGGACTGGGATGAGCCCCAGTGGAAAGAAAAGCAGTCTGAGTGCGCGACCAGAGTGGAAATAGTTAGGCAGAGTTTACAAGGGAGAAACACAAAAGTTGCAGTGGTTCTGATTCAGAAGAAAACCCCTTTGCCCCCAGGAGAAGATGTCATTGCTTCAGAAAGGGCTGCAGCCTTGTGCAATGCGTGTGAACTCTCGGGGAAGTCTTTGTTTGTACTGCCCCATACGGACCACCTTGTGGGTTATATTATAAGATTAGAAAACGCCTTTTATGAACATGCACAGACTTATTACTACACTGAAATTAGAAGAGTGAAATCTCATAAAGAATTTTTGAATAAAACAACACACCAGCTTTTATTTGTTAGACATCAGTTCAAAATAGCTTTCTTCAGTGAGTTGAAACAAGATACACAAAATGCTCTGAAGAATTACAGGACCGCCTATAATCTTGTACATGAATTGAGAGCCCATGAAACTAATATTCTGGAAATTAAGACCATGGCAGGATTTATAAACTACAAGATCTGTAGGCTGTGTTTTCAGCACAACACCCCACTGGATGCAATTGCTCAGTTCCGAAAGCACATCGACTTGTGTAAGAAAAAAATCGGAAGTGCAGAGTTGTCTTTTGAGCATGCTGCATGGATGTCTAAACAATTCCAGGCCTTTGGAGATTTATTTGATGAAGCTATCAAGTTGGGGTTGACAGCTATTCAAACTCAGAATCCTGGTTTCTATTACCAGCAGGCAGCATACTATGCCCAGGAGCGGAAACAGCTTACGAAAACCCTCTGTAACCACGAAGCTTCTATAACGTACCCCAGTCCTGATCCCTTAGAAACGCAAACAGGACTTCTTGACTTCTACGGACAACGATCCTGGCGACAAGGAATACTAAGTTTTGATCTTTCTGATCCCGAAAAAGAGAAGGTGGGGATTCTTGCCATTCAGCTGAAGGAGAGAAGTGTTGTTCACTCTGAAATAATAATAACTCTTCTGAGCAAYGCTGTTGCGCAATTTAAGAAATATAAGTGTCCAAGAATGAAAAGTCATCTGATGGTTCAAATGGGAGAGGAATATTATTATGCAAAGGATTATACCAAAGCTTTGAAGTTGCTGGATTATGTGATGTGTGATTATCGGAGTGAAGGATGGTGGACCCTGCTCACGTCTATACTGACCACAGCTCTGAAGTGTTCCTACCTCATGGCCCAACTGAAAGATTACATCACTTATTCCCTAGAACTCCTTGGAAGAGGTTCAACTCTGAAAGATGACCAGAAATCTCGGATAGAAAAAAACCTCATAAATGTCTTAATGAATGAAAGTCCTGATCCTGAACCTGACTGTGATATATTAGCTGTGAAAACTGCTCAGAAGCTGTGGGCGGACCGAATTTCTCTGGCCGGCAACAATCTTTTCACAATAGGCGTACAGGACTTTGTGCCATTTGTGCAATGCAAAGCCAAGTTCCACGCCCCAAGTTTTCATGTYGATGTTCCCGTGCAGTTCGATATTTATCTGAAGGCTGATTGTCCACATCCCATTAGGTTTTCTAAGCTCTGTGTCAGCTTTAATAATCAGGAATACAACCAGTTCTGTGTAATCGAAGACGCATCCAAAGCAAGTGACGTTTTAGAAAATTTGACTCAGGGAAAGATGTGCTTAGTTCCTGGTAAAACAAGGAAGTTTTTATTTAAATTTGTGGCAAAAACTGAAGATGTGGGAAAGAAAATTGAGATCACATCCTTGGATCTGGTTCTGGGCAACGAGGCAGGAAGATGCGTGGTCTTGAATTGGCAGGGAGGAGGAGGAGATGCCGCTTCCACCCAGGAAGCCTTACAGGCCTCCCGTTCTTTCAAAAGAAGGCCCCGGCTCCGCGACAGCGAGGTTCACTGGGACAGCATAGTGATCCAGGCGAGCACCATGATCATTTCCAGAGTTCCAAACATTTCTGTCCATCTGCGACATGACCCTCCTGCCCTGACTAACGAAATGTACTGTTTGGTKGTGACTGTGCAGTCCCACGAGAAGACCCCCATCAGAGACGTGAAGCTCACTGCTGGTTTAAAACCCGGACAGGATGCCAATTTAACTCAGAAAACTCACGTGACTCTTCATGGAACAGAACTGTGTGATGAGTCCTACCCGGCTCTACTCACGGACATTCCTGTCGGAGACCTGCATCCCGGGGAGCAGCTGGAAAAAATGTTATATGTTCGCTGTGGAACAGTGGGCTCAAGAATGTTTCTTGTGTATGTTTCTTACCTGATCAATACAACTATTGAAGAAAAAGAAATTGTTTGCAAGTGTCACAAGGATGAAACTGTAACAATAGAAACCGTCTTTCCATTTGACGTTGCAGTTAAATTTGTTTCTACAAAGTTTGAGCACCTGGAAAGGGTTTATGCCGACATCCCTTTCCTGCTGATGACGGACCTGTTGAGTGCCTCCCCCTGGGCCCTCACCATCGTCTGCAGTGAGCTGCAGCTCGCTCCTTGCATGACGCCCGTGGACCAGCTGGAGTCCCAGGTGGCCGGCGTTGTCTTACAGACTACAGAGAGCGCCAGTGAATGCTTTTGCCTTCGTTGCCCATCTGTTGGAAATGTTGAAGGTGGAGTAGCAACTGGGCATTATATTATCTCCTGGAAGAGGACTTCAGCCATGGACAACATCCCTGTCATCAGCACTGTCATCACTCTGCCACACGTGATTGTAGAAAATATCCCTCTCCATGTGAATGCAGATCTGCCATCATTCGGGCGTGTCAGAGAGTCRTTACCAGTCAAGTATCACCTCCAGAATAAGACTGACTTAGTTCAAGATGTGGAGATTTCTGTGGAGCCCAGTGATGCCTTCATGTTCTCMGGTCTTAAACAGATTCGATTACGTATCCTCCCTGGCACCGAACAGGAAATGTTATATAATTTCTACCCTCTGATGGCCGGGTACCAGCAGCTGCCATCTCTCAACATCAACTTGCTCAGGTTTCCCAACTTCACGAATCAACTGCTCAGGCGTTTTATACCCACCAGTATTTTTGTAAAGCCCCAGGGCCGACTCATGGACGACGCCTCCATCGCTGCCGCGTGA

Related Sequences

bmy_13037T0 Protein

Length: 1134 aa      View alignments
>bmy_13037T0
MSPTQWDFPVELCCRPMAFVTLTGLDVVYNAVHRAVWDAFCANRRADRVPISFKVLPGDHEYPKCRPKRTSYEWYIPKGILKTGWMNKHLNLVPALVVVFYELDWDEPQWKEKQSECATRVEIVRQSLQGRNTKVAVVLIQKKTPLPPGEDVIASERAAALCNACELSGKSLFVLPHTDHLVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLLFVRHQFKIAFFSELKQDTQNALKNYRTAYNLVHELRAHETNILEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHIDLCKKKIGSAELSFEHAAWMSKQFQAFGDLFDEAIKLGLTAIQTQNPGFYYQQAAYYAQERKQLTKTLCNHEASITYPSPDPLETQTGLLDFYGQRSWRQGILSFDLSDPEKEKVGILAIQLKERSVVHSEIIITLLSNAVAQFKKYKCPRMKSHLMVQMGEEYYYAKDYTKALKLLDYVMCDYRSEGWWTLLTSILTTALKCSYLMAQLKDYITYSLELLGRGSTLKDDQKSRIEKNLINVLMNESPDPEPDCDILAVKTAQKLWADRISLAGNNLFTIGVQDFVPFVQCKAKFHAPSFHVDVPVQFDIYLKADCPHPIRFSKLCVSFNNQEYNQFCVIEDASKASDVLENLTQGKMCLVPGKTRKFLFKFVAKTEDVGKKIEITSLDLVLGNEAGRCVVLNWQGGGGDAASTQEALQASRSFKRRPRLRDSEVHWDSIVIQASTMIISRVPNISVHLRHDPPALTNEMYCLVVTVQSHEKTPIRDVKLTAGLKPGQDANLTQKTHVTLHGTELCDESYPALLTDIPVGDLHPGEQLEKMLYVRCGTVGSRMFLVYVSYLINTTIEEKEIVCKCHKDETVTIETVFPFDVAVKFVSTKFEHLERVYADIPFLLMTDLLSASPWALTIVCSELQLAPCMTPVDQLESQVAGVVLQTTESASECFCLRCPSVGNVEGGVATGHYIISWKRTSAMDNIPVISTVITLPHVIVENIPLHVNADLPSFGRVRESLPVKYHLQNKTDLVQDVEISVEPSDAFMFSGLKQIRLRILPGTEQEMLYNFYPLMAGYQQLPSLNINLLRFPNFTNQLLRRFIPTSIFVKPQGRLMDDASIAAA*