Part of scaffold_808 (Scaffold)

For more information consult the page for scaffold_808 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP50 ENSTTRG00000016806 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 50

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015932, Bottlenosed dolphin)

Protein Percentage 85.61%
cDNA percentage 89.71%
Ka/Ks Ratio 0.87203 (Ka = 0.1089, Ks = 0.1249)

BT.42555 ENSBTAG00000011929 (Cow)

Gene Details

ubiquitin specific peptidase 50

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015823, Cow)

Protein Percentage 82.75%
cDNA percentage 86.85%
Ka/Ks Ratio 0.54537 (Ka = 0.1232, Ks = 0.2259)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 858 bp    Location:495986..504375   Strand:+
>bmy_13048
ATGCTTTCCTTTCTTTCCATGTGGCACCAACACAGCACAGAGTGCACAGATCACTATGACCCCTTTCCAGTTAACGAGGCTGATGAGAACCGGCCCCATTTCCAGGGTGTGACTGGTCTGCGGAACCTGGGCAACACATGCTACATGAATGCCATCTTACAGTGTCTCTGCAGCATCTCACCGCTGGTGGAATACTTTCTCTCTGGAAAGTACATTACCGCTCTTCAAAAGGATTGCAGTGAGGTTGCCACTGCTTTTGCCTATGTGATGACAGATATGTGGCTTGGAGACTCTGACTGTGTCTCACCAGAAATATTTTGGTCAGCTCTTGGCAAACTCTACCCAGCATTTATGAAAAAGATGCAGCAAGATGCTCAGGAATTCTTGATTTATGTCCTGAATGAACTTCATGAAACTCTGAAAAAGTACCACCGAAGAAGATCATATGAAAAAAGATCTATTCCGAGATTCTGCAGGAAGATGATTGCCAACGAGTCCTCCATCATCACCCGGCTGTTTGAAGGGCAGCTCAATTATAGCATCATATGTTTAAAGTGTGAGAACTGTACCTACAAGAATGAAGTCTTCACCGTCCTCTCCCTCCCCATTCCATCCAAATACGAGTGCTCTCTTCAGGACTGTCTCCAACACACTGACCTGGAACAACCAGATTTACTGTTCCTTTTGCGAAACCAAGCAAGAAACAGCTGTGAAGGCCAGTTTGACATTCTGGGTACAATGAAAAGGAAACTGAGGACAGATATTCATTACCCGCTCACTAACTTGGACCTTACTCCTTACATTTGTCCAGTTTTTCGGAAACATCCTAAATATAACCTCTGTGCAGTGGTGCCTTGA

Related Sequences

bmy_13048T0 Protein

Length: 286 aa      View alignments
>bmy_13048T0
MLSFLSMWHQHSTECTDHYDPFPVNEADENRPHFQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFAYVMTDMWLGDSDCVSPEIFWSALGKLYPAFMKKMQQDAQEFLIYVLNELHETLKKYHRRRSYEKRSIPRFCRKMIANESSIITRLFEGQLNYSIICLKCENCTYKNEVFTVLSLPIPSKYECSLQDCLQHTDLEQPDLLFLLRNQARNSCEGQFDILGTMKRKLRTDIHYPLTNLDLTPYICPVFRKHPKYNLCAVVP*