Part of scaffold_808 (Scaffold)

For more information consult the page for scaffold_808 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HDC ENSTTRG00000016795 (Bottlenosed dolphin)

Gene Details

histidine decarboxylase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015923, Bottlenosed dolphin)

Protein Percentage 97.57%
cDNA percentage 97.44%
Ka/Ks Ratio 0.15447 (Ka = 0.0112, Ks = 0.0727)

HDC ENSBTAG00000009911 (Cow)

Gene Details

Histidine decarboxylase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013083, Cow)

Protein Percentage 91.71%
cDNA percentage 92.15%
Ka/Ks Ratio 0.17886 (Ka = 0.0416, Ks = 0.2327)

HDC  (Minke Whale)

Gene Details

histidine decarboxylase

External Links

Gene match (Identifier: BACU003211, Minke Whale)

Protein Percentage 98.5%
cDNA percentage 98.19%
Ka/Ks Ratio 0.1271 (Ka = 0.0069, Ks = 0.0542)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1608 bp    Location:707155..735508   Strand:+
>bmy_13054
ATGATGGAACCTGAGGAGTACAGAAGGAGAGGAAAGGAGATGGTGGATTACATCTGCCAGTACCTGAGCAGCGTGCAGGAGCGGCGGGTGACTCCGGATGTGAGGCCTGGCTACCTGCGGGCCCAGCTGCCCGAGAGTGCGCCCGAGGAGCCCGACAGCTGGGACAGCATCTTTGGGGACATTGAACGAATCATCATGCCCGGGAGCACAGTCAGTGAGTCCACCTTGATCGCCTTGCTGGCAGCAAGGAAGAACAAAATCCTGGAAATAAAAGCGTCTGAGCCCGGGGCGGATGAGTCTTCCCTGAACGCCCGGCTTGTTGCCTATGCCTCCGACCAGGCCCACTCCTCGGTGGAAAAGGCTGGTTTGATTTCTCTGGTCAAGATGAAATTCCTGCCTGTGGATGACGACTTCTCACTCCGAGGGGAAGTTCTTCAGAAAGCCATCAAGGAGGACAGAGAACAGGGCTTGGTGCCAGTCTTTGTCTGTGCCACCCTGGGGACCACTGGGGTCTGTGCATTTGACCGCCTGTCAGAGCTGGGCCCCATCTGTGCCAACGAGGGGCTGTGGCTCCACATTGATGCTGCCTACGCAGGCACTGCCTTCCTGTGCCCTGAGTTCCGGGGGCTTCTGAAGGGCATCGAGTATGCCGATTCCTTCACCTTTAATCCTTCCAAGTGGATGATGGTGCACTTTGACTGTACTGGGTTCTGGGTCAAGGACAAGTACAAGCTGCAGCAGACCTTCAGCGTGAACCCCGTCTACCTCAGGCATGCCGACTCGGGTGCGGCCACCGACTTCATGCACTGGCAGATCCCCCTGAGCAGGCGGTTTCGCTCTATTAAACTCTGGTTTGTGATCCGGTCCTTCGGGGTGAAGAATCTTCAAGCGCACATCAGACATGGTACTGAAATGGCTAAGTATTTTGAATCTCTGGTCAGAAACGAACCTTTCTTTGAAATTCCTGCCAAGAGGCACCTTGGCCTGGTGGTTTTTCGTCTAAAGGGTCCTAATTGCCTCACAGAAAGTGTGTTAAAGGAAATAGCTAAAGCTGGCCGTCTCTTCCTCATCCCAGCCACTATCCAGGACAAGTTGATCATCCGTTTCACTGTGACATCCCAGTTCACCACCAGGGATGACATCCTGAGAGACTGGAATCTCATTCATGATGCTGCCACTCTCATCCTGAGTCAACATTGTACTTCCCAGCCTAGCCCTCAGGGTGGGAACCTCATCCCCCAAACCAGGGGCCCCAGAGCCTTGGCCAAGGAACTGTCCTTTCCATCTGTCAGCGGGGCAGGAGATGACCCAGTCCAGGCCAGGAAGATCATCACGCAGCCTCCACATGTGGGAGCCAGTCCTGTGAGAGGGGAAGGCAGCTGCCACCTTGAAACCCTGCTGGACCCACTTGATGACTGCTTTTCAGAAGAGGCCCCAGACCTCACCAAGCACAAGCTGTCCTCCTTCCTGTTCAATTATTTGTCTGTGCAGAATAAGAAGAAGGCAGTGCGTTCCCTCAGTTGCAACAGCGTGCCTGTGGGCGATCAGAAGCCACTGCCCACAGATGGCTCTGTGAAGAATGGCGGCTCCTCCCGGGTTCGGGTGTAA

Related Sequences

bmy_13054T0 Protein

Length: 536 aa      View alignments
>bmy_13054T0
MMEPEEYRRRGKEMVDYICQYLSSVQERRVTPDVRPGYLRAQLPESAPEEPDSWDSIFGDIERIIMPGSTVSESTLIALLAARKNKILEIKASEPGADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDDFSLRGEVLQKAIKEDREQGLVPVFVCATLGTTGVCAFDRLSELGPICANEGLWLHIDAAYAGTAFLCPEFRGLLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPVYLRHADSGAATDFMHWQIPLSRRFRSIKLWFVIRSFGVKNLQAHIRHGTEMAKYFESLVRNEPFFEIPAKRHLGLVVFRLKGPNCLTESVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIHDAATLILSQHCTSQPSPQGGNLIPQTRGPRALAKELSFPSVSGAGDDPVQARKIITQPPHVGASPVRGEGSCHLETLLDPLDDCFSEEAPDLTKHKLSSFLFNYLSVQNKKKAVRSLSCNSVPVGDQKPLPTDGSVKNGGSSRVRV*