Part of scaffold_808 (SequenceType object (1))

For more information consult the page for scaffold_808 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HDCENSTTRG00000016795 (Bottlenosed dolphin)

Gene Details

histidine decarboxylase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015923, Bottlenosed dolphin)

Protein Percentage 97.57%
cDNA percentage 97.44%
Ka/Ks Ratio 0.15447 (Ka = 0.0112, Ks = 0.0727)

HDCENSBTAG00000009911 (Cow)

Gene Details

Histidine decarboxylase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013083, Cow)

Protein Percentage 91.71%
cDNA percentage 92.15%
Ka/Ks Ratio 0.17886 (Ka = 0.0416, Ks = 0.2327)

HDC (Minke Whale)

Gene Details

histidine decarboxylase

External Links

Gene match (Identifier: BACU003211, Minke Whale)

Protein Percentage 98.5%
cDNA percentage 98.19%
Ka/Ks Ratio 0.1271 (Ka = 0.0069, Ks = 0.0542)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1608 bp    Location:707155..735508   Strand:+
>bmy_13054
ATGATGGAACCTGAGGAGTACAGAAGGAGAGGAAAGGAGATGGTGGATTACATCTGCCAGTACCTGAGCAGCGTGCAGGAGCGGCGGGTGACTCCGGATGTGAGGCCTGGCTACCTGCGGGCCCAGCTGCCCGAGAGTGCGCCCGAGGAGCCCGACAGCTGGGACAGCATCTTTGGGGACATTGAACGAATCATCATGCCCGGGAGCACAGTCAGTGAGTCCACCTTGATCGCCTTGCTGGCAGCAAGGAAGAACAAAATCCTGGAAATAAAAGCGTCTGAGCCCGGGGCGGATGAGTCTTCCCTGAACGCCCGGCTTGTTGCCTATGCCTCCGACCAGGCCCACTCCTCGGTGGAAAAGGCTGGTTTGATTTCTCTGGTCAAGATGAAATTCCTGCCTGTGGATGACGACTTCTCACTCCGAGGGGAAGTTCTTCAGAAAGCCATCAAGGAGGACAGAGAACAGGGCTTGGTGCCAGTCTTTGTCTGTGCCACCCTGGGGACCACTGGGGTCTGTGCATTTGACCGCCTGTCAGAGCTGGGCCCCATCTGTGCCAACGAGGGGCTGTGGCTCCACATTGATGCTGCCTACGCAGGCACTGCCTTCCTGTGCCCTGAGTTCCGGGGGCTTCTGAAGGGCATCGAGTATGCCGATTCCTTCACCTTTAATCCTTCCAAGTGGATGATGGTGCACTTTGACTGTACTGGGTTCTGGGTCAAGGACAAGTACAAGCTGCAGCAGACCTTCAGCGTGAACCCCGTCTACCTCAGGCATGCCGACTCGGGTGCGGCCACCGACTTCATGCACTGGCAGATCCCCCTGAGCAGGCGGTTTCGCTCTATTAAACTCTGGTTTGTGATCCGGTCCTTCGGGGTGAAGAATCTTCAAGCGCACATCAGACATGGTACTGAAATGGCTAAGTATTTTGAATCTCTGGTCAGAAACGAACCTTTCTTTGAAATTCCTGCCAAGAGGCACCTTGGCCTGGTGGTTTTTCGTCTAAAGGGTCCTAATTGCCTCACAGAAAGTGTGTTAAAGGAAATAGCTAAAGCTGGCCGTCTCTTCCTCATCCCAGCCACTATCCAGGACAAGTTGATCATCCGTTTCACTGTGACATCCCAGTTCACCACCAGGGATGACATCCTGAGAGACTGGAATCTCATTCATGATGCTGCCACTCTCATCCTGAGTCAACATTGTACTTCCCAGCCTAGCCCTCAGGGTGGGAACCTCATCCCCCAAACCAGGGGCCCCAGAGCCTTGGCCAAGGAACTGTCCTTTCCATCTGTCAGCGGGGCAGGAGATGACCCAGTCCAGGCCAGGAAGATCATCACGCAGCCTCCACATGTGGGAGCCAGTCCTGTGAGAGGGGAAGGCAGCTGCCACCTTGAAACCCTGCTGGACCCACTTGATGACTGCTTTTCAGAAGAGGCCCCAGACCTCACCAAGCACAAGCTGTCCTCCTTCCTGTTCAATTATTTGTCTGTGCAGAATAAGAAGAAGGCAGTGCGTTCCCTCAGTTGCAACAGCGTGCCTGTGGGCGATCAGAAGCCACTGCCCACAGATGGCTCTGTGAAGAATGGCGGCTCCTCCCGGGTTCGGGTGTAA

Related Sequences

bmy_13054T0 SequenceType object (3)

Length: 536 aa      View alignments
>bmy_13054T0
MMEPEEYRRRGKEMVDYICQYLSSVQERRVTPDVRPGYLRAQLPESAPEEPDSWDSIFGDIERIIMPGSTVSESTLIALLAARKNKILEIKASEPGADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDDFSLRGEVLQKAIKEDREQGLVPVFVCATLGTTGVCAFDRLSELGPICANEGLWLHIDAAYAGTAFLCPEFRGLLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPVYLRHADSGAATDFMHWQIPLSRRFRSIKLWFVIRSFGVKNLQAHIRHGTEMAKYFESLVRNEPFFEIPAKRHLGLVVFRLKGPNCLTESVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIHDAATLILSQHCTSQPSPQGGNLIPQTRGPRALAKELSFPSVSGAGDDPVQARKIITQPPHVGASPVRGEGSCHLETLLDPLDDCFSEEAPDLTKHKLSSFLFNYLSVQNKKKAVRSLSCNSVPVGDQKPLPTDGSVKNGGSSRVRV*