Part of scaffold_809 (Scaffold)

For more information consult the page for scaffold_809 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM68 ENSTTRG00000001028 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 68

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000967, Bottlenosed dolphin)

Protein Percentage 98.95%
cDNA percentage 98.24%
Ka/Ks Ratio 0.08431 (Ka = 0.0047, Ks = 0.0559)

TRIM68 ENSBTAG00000011332 (Cow)

Gene Details

E3 ubiquitin-protein ligase TRIM68

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015061, Cow)

Protein Percentage 93.97%
cDNA percentage 92.82%
Ka/Ks Ratio 0.13586 (Ka = 0.0307, Ks = 0.2262)

TRIM68  (Minke Whale)

Gene Details

tripartite motif containing 68

External Links

Gene match (Identifier: BACU004519, Minke Whale)

Protein Percentage 99.37%
cDNA percentage 98.66%
Ka/Ks Ratio 0.11354 (Ka = 0.004, Ks = 0.0349)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1752 bp    Location:28676..6423   Strand:-
>bmy_13067
ATGGGAGATGCAGGTGTTGAAAGCCTTGAGTGCTGCCCCCCGAGAGGACAGCTCCAACACAGCCCTCAGAATGAGGATACAGGAGAAGCCAGGGAAGAGAGAGTCGACGTCCATGACCGCGAGGATGATGAAGAGCCCGTACACCACACTGACCATGGTGTCAATGCCGCCGGCGAGCTCATTGGCTCCGGCCCTGTGGGCGGGGCCTCGGAATCCTGCAGGAGAAACCAAGGAGCTGGGCGCTGCTGGGGCCTTGGTCTCCGCGCCGGCGCCTTCAGTGGCTCCTCCTGGTTTTATTCATGTTCTGAGGAGGGTGTGACAGGAGCCATGGATCCCGCAGCATTGGTGGAAGCCGTTGTAGAAGAAGTGGCCTGTCCCATCTGCATGACCTTCCTGAAAGAGCCCGTGAGCATCGACTGTGGCCACAGCTTCTGCCACAACTGTCTCTCTGGACTCTGGGAAGTCCCAGGAGAATCCCAGAACTGGGGTTACTCGTGTCCCCTCTGCCGGGCTCCCGTCCAGCCAAGGAACCTGCGGCCTAATTGGCAGCTGGCCAATGTTGTAGAAAAAGTCCGACGGCTAGGGCTGCATCCAGGAATGGGGCTGAAGGGCGACGTGTGCGAGACCCACGAGGAACAGCTAAAGATGTTCTGCAAAGAGGATGGCCTGATCGTGTGCGAGGCCTGTGGCCGGTCCCCCGAGCACGAGGCCCACAGTGTCGTGCCCATGGAGGATGTCGCCTGGGATTATAAGTGGAAACTCCATGAGGCTCTGGAACATCTGAGGAAAGAGCAAGAAGAGGCCTGGAAGCTGGAAATACAGGTGGAAACCCGAAAGCAGAGCATCATATGGGAGTTTGAGAAATACCGGCGATTACTAAAGAAAACACAGCCACCAGGTCGGCGGCTGGAAGTAGAGGCCGCCGCCGCTCTGGCCAGCCTGGAGCAGGAGGAAGGGGAGACCACGCAGAAACTGGGGGTGAGTCACAATGCACTCATCCAGCAGAGCCGGGTCCTGTGGAGGATGATCGCAGAGCTGGAAGAAAGGTCTCAGAGGCCTGTCCGCTGGATGCTGCAGGGTATTCAGGAAGTCTTAAACAGGAGCAAGTCTTGGAGCCTGCAGAGACCAGAACCAGTCTCGCTGGAGCTGAAGACGGACTGCCGTGTGCTGGGGCTCAGAGAGATCCTGAAGACATATGCAGCGGATGTGCGGCTGGATCCAGACACTGCTTATTCTCGCCTCATCGTGTCTGAGGACAGAAAATGCGTGCGCTATGGAGACACCAAGCAGAAGCTGCCCGACAATCCTGAGAGATTTTATCGCTACAATATAGTCCTGGGCAGTCAGTGCATCTCCTCGGGTCGGCACTACTGGGAGGTGGAGGTGGGAGACAGGTCTGAATGGGGCCTGGGAGTGTGTAAGGAAAATGTAGACCGGAAGGAGGTGGTCTATTTATCCCCCCACTACGGATTCTGGGTGATAAGGCTGAGGAAGGGCAATGAGTACCGGGCAGGCACTGATGAATACCCGCTCCTGTCCTTGCCCGTCCCTCCCCGCCGGGTGGGAGTCTTCCTGGATTACGAGGCCCATGATATCTCCTTCTACAACGTGACTGACAGCGGCTCCCACATTTTCACTTTCCCCCACTATCCCTTCCCTGGGCGCCTCCTRCCCTATTTCAGTCCTTGCTACAGCATYGGAGCCAACAACACCGCTCCCCTGGCCATCTGCTCCCTGGACGGAGAGGAATAA

Related Sequences

bmy_13067T0 Protein

Length: 584 aa      View alignments
>bmy_13067T0
MGDAGVESLECCPPRGQLQHSPQNEDTGEAREERVDVHDREDDEEPVHHTDHGVNAAGELIGSGPVGGASESCRRNQGAGRCWGLGLRAGAFSGSSWFYSCSEEGVTGAMDPAALVEAVVEEVACPICMTFLKEPVSIDCGHSFCHNCLSGLWEVPGESQNWGYSCPLCRAPVQPRNLRPNWQLANVVEKVRRLGLHPGMGLKGDVCETHEEQLKMFCKEDGLIVCEACGRSPEHEAHSVVPMEDVAWDYKWKLHEALEHLRKEQEEAWKLEIQVETRKQSIIWEFEKYRRLLKKTQPPGRRLEVEAAAALASLEQEEGETTQKLGVSHNALIQQSRVLWRMIAELEERSQRPVRWMLQGIQEVLNRSKSWSLQRPEPVSLELKTDCRVLGLREILKTYAADVRLDPDTAYSRLIVSEDRKCVRYGDTKQKLPDNPERFYRYNIVLGSQCISSGRHYWEVEVGDRSEWGLGVCKENVDRKEVVYLSPHYGFWVIRLRKGNEYRAGTDEYPLLSLPVPPRRVGVFLDYEAHDISFYNVTDSGSHIFTFPHYPFPGRLLPYFSPCYSIGANNTAPLAICSLDGEE*