Part of scaffold_820 (Scaffold)

For more information consult the page for scaffold_820 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CRISP1 ENSTTRG00000003518 (Bottlenosed dolphin)

Gene Details

cysteine-rich secretory protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003298, Bottlenosed dolphin)

Protein Percentage 75.71%
cDNA percentage 80.3%
Ka/Ks Ratio 0.83981 (Ka = 0.0855, Ks = 0.1018)

CRISP1 ENSBTAG00000008085 (Cow)

Gene Details

cysteine-rich secretory protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010633, Cow)

Protein Percentage 79.35%
cDNA percentage 85.16%
Ka/Ks Ratio 0.31011 (Ka = 0.1176, Ks = 0.3793)

CRISP1  (Minke Whale)

Gene Details

cysteine-rich secretory protein 1

External Links

Gene match (Identifier: BACU018768, Minke Whale)

Protein Percentage 85.9%
cDNA percentage 88.99%
Ka/Ks Ratio 0.50863 (Ka = 0.0973, Ks = 0.1912)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 777 bp    Location:506550..517533   Strand:+
>bmy_13135
ATGGAGACTAATATACTGAGATGTTGTAGATTAAAAAATGCTGTTGATCACTATTCATTCAACATCAATTATAAATTCATGTCACAAAGTCTACAAGCAAAACCACCTAAAGTTCCATATGATACACTCCTTACAGAACTGGCAACTGTCCAAGAAGAAATAGTGGCTGTACATAACACCCTCAGGAGAGGAGTATTTCCACCAGCCAGCAACATGCTAAAAATGAACTGGAGTGAAGAAGCTGCAAGAAATGCCAGAATGSTGTCAAAAGATTGTGAATTGGTAGAGAGCAATGCACTTAAGAGGCGAATTACAAATACTTTTTGTGGAGAAAATATGCATCTGACATCTTACCCTATCTCATGGTCAAACGTAATCAGAATCTGGTACAGTGAGTCTAAATATTTCAAGTATGGGGAATGGACCTCAACAGATGATGACATGATGATTGAGCATTACACKCAGGTTGTTTGGGCCACTTCTTACCTTATTGGCTGTGGCATATCATCATGTCRTAAAGGAATTCAGTATCTCTACGTTTGTCACTATTGTCACGAGGGCAATGATCCTGACAAAAAGAATGTACCTTATAATAAGGGAACTCCATGCGGAGACTGTCCAAATAACTGTGAAGATAAACTTTGTACGAACCCTTGCGTCTACTACGATGAATACAGTAATTGTAAGACACAGACACGAGGAGGTCCTGCCTGCAGCCACCTGTCAGTTCAACGACTCTGCAAAGCTAGTTGTCTGTGTCCCACTGAGATAAAATAG

Related Sequences

bmy_13135T0 Protein

Length: 259 aa      View alignments
>bmy_13135T0
METNILRCCRLKNAVDHYSFNINYKFMSQSLQAKPPKVPYDTLLTELATVQEEIVAVHNTLRRGVFPPASNMLKMNWSEEAARNARMXSKDCELVESNALKRRITNTFCGENMHLTSYPISWSNVIRIWYSESKYFKYGEWTSTDDDMMIEHYTQVVWATSYLIGCGISSCXKGIQYLYVCHYCHEGNDPDKKNVPYNKGTPCGDCPNNCEDKLCTNPCVYYDEYSNCKTQTRGGPACSHLSVQRLCKASCLCPTEIK*