Part of scaffold_861 (Scaffold)

For more information consult the page for scaffold_861 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB5A ENSTTRG00000001374 (Bottlenosed dolphin)

Gene Details

RAB5A, member RAS oncogene family

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001289, Bottlenosed dolphin)

Protein Percentage 95.86%
cDNA percentage 95.66%
Ka/Ks Ratio 0.31969 (Ka = 0.0307, Ks = 0.0961)

BT.24043 ENSBTAG00000046385 (Cow)

Gene Details

ras-related protein Rab-5A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056220, Cow)

Protein Percentage 99.38%
cDNA percentage 91.3%
Ka/Ks Ratio 0.0069 (Ka = 0.003, Ks = 0.4309)

RAB5A  (Minke Whale)

Gene Details

RAB5A, member RAS oncogene family

External Links

Gene match (Identifier: BACU019209, Minke Whale)

Protein Percentage 88.17%
cDNA percentage 91.91%
Ka/Ks Ratio 0.4751 (Ka = 0.0696, Ks = 0.1464)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 510 bp    Location:285195..296987   Strand:+
>bmy_13197
ATGTTAACAGTATGGTGTTACCCAGCTGCTTTTCTAACCCAAACGGTGTGTCTTGATGACACAACGGTAAAGTTTGAAATATGGGATACAGCTGGTCAAGAACGATACCATAGCCTAGCACCAATGTACTACAGAGGAGCACAAGCAGCCATAGTTGTATATGATATCACAAACGAGGAGTCCTTTGCCAGAGCCAAAAACTGGGTTAAAGAGCTTCAGAGGCAGGCCAGCCCTAACATTGTTATAGCTTTGTCAGGAAACAAGGCTGACCTCGCAAATAAAAGAGCTGTCGATTTCCAGGAAGCACAGTCCTATGCAGATGACAACAGTTTATTATTTATGGAGACATCAGCTAAAACATCAATGAATGTAAATGAAATATTCATGGCAATAGCTAAAAAGTTGCCGAAGAATGAACCACAGAATCCAGGAGCAAATTCTGCCAGAGGAAGAGGAGTAGACCTTACTGAACCCACGCAGCCAACCAGGAGTCAATGCTGTAGTAACTAA

Related Sequences

bmy_13197T0 Protein

Length: 170 aa      View alignments
>bmy_13197T0
MLTVWCYPAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRSQCCSN*