Part of scaffold_861 (Scaffold)

For more information consult the page for scaffold_861 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PP2D1 ENSBTAG00000004061 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005303, Cow)

Protein Percentage 71.93%
cDNA percentage 80.86%
Ka/Ks Ratio 0.40713 (Ka = 0.172, Ks = 0.4225)

PP2D1  (Minke Whale)

Gene Details

protein phosphatase 2C-like domain containing 1

External Links

Gene match (Identifier: BACU009977, Minke Whale)

Protein Percentage 95.64%
cDNA percentage 97.51%
Ka/Ks Ratio 0.48762 (Ka = 0.0203, Ks = 0.0415)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1638 bp    Location:334675..295622   Strand:-
>bmy_13198
ATGGTCCTGGGGTGCGGGCGGCGGGTGCCGGCCTCTCGAGTGTTTTGGAAATCAAGGCAATTGTACACAAGAAAACTGACATATGATTCAGATGAGGGAGTCCCACTTACACGGAGAAGAAAGCATTTTAAAAGGAAAAAGAAGAGACCATCAAAAGACTCTGAAAAACACGAAGTGCAGGTCTATAATGAGATGATCACATTTCCCTGTTCCATATGCAAGCATGAAATTGACCTACCTGGAATATTCCTCCATAAAAAGCAGCATGTAGCTCTGGCTACATTGGGCTTTCAGTGGATGGGTGGGAAGAAACCAGGGCTCTCAACGATTGCTGATCAGAGGCAGTCCATCATTGCTAAACTATTGTCATCTTTTGCATTTACTGAAAAAATCTTACAGAGCATTAATAATGCTTTTGAGCTTCTTTGGAAGAAACAAATACCAGCGTACTATAAGATTACTGATAACATTCACAAGAGTTCAATATATCCTCAAAAAATCTGTCACCTATTAATTAAAGGAGCAGCCATTTGCGAAGACAGGAATTCTACATGGAGAGCTGACATGAATGATAAATTCACTGTCGTGAATAATTTTGGCAACAAACCCAATGTGTGTTTTTTTGGTTTGTTTGATGGACATCACGGTGCCTCGGCAGCAGAATTGACATCAATGGAACTCCCAGTTTTACTTCTCCACCAGCTTTCCAGACTTGATCCTTCCTACCAAATGACCCCTGAAGAGCAAAAAGTAATCAATTCTTTTCACACAGTGTTTAGAGAAGACTACAGAGCTATAGAAGACTCCTTCTCCTCCATAAAGAAAAAGGCAAAAGCATTGAAAAGTGAGTATGAGAACATACACAAAGCCTTTGCGAAAGCATTTTGGAGAATGGACAGGCTTTTACGTCTTGGAAGGAAAGAAGTGTCCAGGGCTCGATGGAGCGGCTGTTCTGCGGTTACTTGCATATTGGAAGGCAACATTAAAAGTCCCAAAGCTAAGAAGTCTTGGAGAAGATTCAGTGACCTTGATGCTTTGGTCCCTTTCCAGGGGATGCCAAAAATAATTTCTGGAGTGCTACATATTGCAAACACTGCTACTAATGGACTCTGGGAAGTTCTGGATACAAAGGAAGTCACTGCACTGACAATGACAGCTTTTCAAGTATATAAAGAAGCACAGTGTTCTATCACAGGAAACAAATTGTCACCATCCAAAGGGTCTCTGCTTCTCCCAATCGATGAACGAAACACATCTAAACCAGAAACTAACGTCCATATAGTGTTTCAGTGCAAATCTGAAGAATGTGTGTCAGCTGTAAGTTCAAAAGAAAATTTGTCAGATTCAAAATATTCTATTTGTAACCTTAAAAATATAGGAACATTTCCACCAAAAATGACTAAGCATGATCCTTGCAGTGAGAAAGAAACTGATGGACCGACCAGTGTAGATGGTGTGCCAAAAGACTCAAGTGAAAAAGAGAAAGGATCATGCACTAAGAGTTTCTATGGAGGTGCTGCTGAGTATATCAGCCATGAACTTGTAAGTGCTGCTTTGGCGGCTGGCTCCAGAGACAACATTACAGTCATGGTCACACTTTTCAATGGAAGCGAGTATCTCCAGAGAGCAAATACATGA

Related Sequences

bmy_13198T0 Protein

Length: 546 aa     
>bmy_13198T0
MVLGCGRRVPASRVFWKSRQLYTRKLTYDSDEGVPLTRRRKHFKRKKKRPSKDSEKHEVQVYNEMITFPCSICKHEIDLPGIFLHKKQHVALATLGFQWMGGKKPGLSTIADQRQSIIAKLLSSFAFTEKILQSINNAFELLWKKQIPAYYKITDNIHKSSIYPQKICHLLIKGAAICEDRNSTWRADMNDKFTVVNNFGNKPNVCFFGLFDGHHGASAAELTSMELPVLLLHQLSRLDPSYQMTPEEQKVINSFHTVFREDYRAIEDSFSSIKKKAKALKSEYENIHKAFAKAFWRMDRLLRLGRKEVSRARWSGCSAVTCILEGNIKSPKAKKSWRRFSDLDALVPFQGMPKIISGVLHIANTATNGLWEVLDTKEVTALTMTAFQVYKEAQCSITGNKLSPSKGSLLLPIDERNTSKPETNVHIVFQCKSEECVSAVSSKENLSDSKYSICNLKNIGTFPPKMTKHDPCSEKETDGPTSVDGVPKDSSEKEKGSCTKSFYGGAAEYISHELVSAALAAGSRDNITVMVTLFNGSEYLQRANT*