Sequence detailsbmy_13210 (Coding sequence)

Part of scaffold_834 (SequenceType object (1))

For more information consult the page for scaffold_834 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZNF438ENSTTRG00000012647 (Bottlenosed dolphin)

Gene Details

zinc finger protein 438

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011998, Bottlenosed dolphin)

Protein Percentage 89.88%
cDNA percentage 94.27%
Ka/Ks Ratio 0.6839 (Ka = 0.0543, Ks = 0.0795)

BT.35916ENSBTAG00000016294 (Cow)

Gene Details

zinc finger protein 438

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021674, Cow)

Protein Percentage 71.89%
cDNA percentage 79.94%
Ka/Ks Ratio 0.38096 (Ka = 0.1784, Ks = 0.4684)

Additional orthologs identified in other species via the OPTIC pipeline.

ZNF438 (Human)   Zfp438 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2544 bp    Location:32679..45774   Strand:+
Raw sequence 
>bmy_13210
ATGTTGAAACCTTGTCTTTCTGTTCATCCCACTAAGGAAAAGGTTTTCTTCACCAACTGTCATCCCAGATATCTGACTCAGAAGAAGTCGGAATCTCCTGGAAAGACAGCATGCACAGGTGAATCAAACAGCCCTCCTGGAACGATTCAGGGTGGGAAGGGTCTGCAGGGTAAGAGTCAGTTTAGAACCATCGCTCCAAAACTTGCGCCCCAAGTCCTGGCGCCCAGAGTGCTCCCGGGCCCGGCGCCCTCCCTCTCTGACCACGCGCATCCAGGCCCCTCCCTCAGCTCGAAGGCCCTGGGGATGCCCCCCCAGAATTACGCGCTGATGCAGGTGGCCGGCCAGGAAGGGACCTTCTCTCTCGTCGCTCTGCCACACGTCGCCTCGGCTCAGCCACTCCAGAAACCCAGACTGCCTCTGCCCAAGAACCTGAAGCTGCCCATCCCCCGGTACCAACGCCCAGGACATAGCAAAGGTGCCAGAAAGAAACCGGGGTTCAGCTCCTCTGACAGGGGCTGTAGCCAAGCTCCCGCCCAAACCCAAGCAGCCCCTCCCCTGCCTGAGCATCCCGAGGCCCCGCACAAGCCCAGCCAACCCAAGCCGGCGCTGGCACCCAGCCAGGCCCCGGCCTCGCTGACCAATGGGGGTGGCCATGGAGACCCTGGGCCCCCAGGGACCAGCGACCACGGAGGTCGGGACCCTCCCGCCGCCCCAGCGCTGTCCACACCGGAGGAGCCCTCTGCCGAGCGGGGCCTCCCGAAGAGTTCAGGGAGAGCAGGCGTTGCAGGCAAGAAGCCCTCCAGGAAGCCTACTGTTTCCAGGGGAGAACTTAGAGAACAGGTCGACCTTGCCAGAGCCGCGAGCCATTTGTCGCCAGGCGTTACTGGAAACGCGGTTCAGGTGGTCTCTTCCATCCCCGGAGGTAAAGTGCCCATCCTGCCCTACTCAAGAACGAGGGCGTCGCAAGTTTACAAAGGCGGAGCAGCTGTGAACCTTGAGGATGTTTCTCTCTCTGGGCTCAGGGCAGCCGGTGATAAGACCTCATCCGTCCTGGAAGGCTTCTGTTCAGCCCCCCAGGTGGCCGACAGGGGACCTGCCCCACAGGCATCGAGGCAGAGCCCCTGCGACAGGGCCTACTGTCCGGCCACCAAAGCCGACCTCAACCACAAAACAAAACCGAACGGCGGGGCAGCCAAGAGAAGAGGAAGAAAACGGAAGGTCCCGGATGAACTTCTGACATTTCAGGGTAAAAGGAGGAAATGTGTCATTAGTAAGTGTAAAGATGGCAAAGAAAGAGCCAAAGCCGATCCCCAAGAGTCCAGGGACCAAAAACCTGGGGTTGTGAAAAAATACCGTAGCATCATGCCCAAACCTGTCCTGGTCCTGCCGGCCCTGGCTCCCCTGGCCTCGCCCGCGGCCACGTTACAGCCCCCCGCGCCCAGCAGCCGGGGGCACGCGTCGTTCAATCACTCCCTCGCCCCCAAGCATCCGGGCTGCAGGCCGGACGAAGGCCCCTCCCCGAAGCCCAGCTCGACCTTCAGAAATGGGTTCTCCGGCCTCAAGAAGCCTTGGCACGGATGCCACGTGTGCGAGCACGCCTTCCAGCCCAAGCAGCACCTCCGCGAGCACGCCAACACGCACGCCGACAGCCGGCCCTACAGCTGCCGCCTCTGCCGCAAAGCCTACGTGCGGCCGGGCAGCCTGAGCGCACACGTGCGGCTGCATCACGGCGACTCCCGGCCCAGGAGGCTCGTGTGCTGCGAATTCTGCGCGAAGGTGTTCGGCCACGTCAGAGTCTACTTCGGCCACCTGAAAGAGGCGCACGGGGTGGCCGTCAGCACCGAGCCGCAGCCGCAGCCGCAGCCGGGGGACCTGCTGAGGACCAGGGAGCAGACTGCCCGAGGGATGGAGGGACCGGTGGACAGGGAGACCAAGTCCAGCCTGGAAGAAGACCTCCTTCTGAACCAGGCTGATGAGGTCAAATTCCAGATCAGATGTGGCCGCTGTCAGATCACTGCCCAGTCTTTTGCTGAAATCAAGTTCCACCTGCTTTACGTTCATGGAGAGGAGATCCAGGGCCAGTTGCAAGAGGAGATCTCACCCTCCTTGGGAAGCAGGGGAGCTCAGGGAGAACTGGTTCCACAGGCTGCTCCTTTCTGGAAACATCCTGAGAGAAGAAAGCAGCTTAAGCACCGTCCCTTGGACGGGGAACTCTGTGCAGTCCCCAGATTGAAAAAGCAGCTCTACCTCCGTCATCAGAATGATGTGGAGATACTTGCGAAACATGAAGGCGCCCAGCCAGGACCCAGTGAGCCCGGAGGACACCCCCAGGGCCCCGAGGGCCCCGGCCCCGACGCTGCCCTCTCCCCACCCCAGCCTGGCTTTAACTGCGTCCTTTGTGCACAGACGCTGGGGAGGAGGGAAGAACTGCTCCTGCACTGGGAAGAGCAGCACAGGTGCCAGGACCCGCCGACCCTCTGGAAGCTTCTGAGCTCGCTCTCCAGCCAGGGCGCCGCCCAGCGTTCCGGCCAGAGCGGAAAGTGA

Related Sequences

bmy_13210T0 SequenceType object (3)

Length: 848 aa      View alignments
>bmy_13210T0
MLKPCLSVHPTKEKVFFTNCHPRYLTQKKSESPGKTACTGESNSPPGTIQGGKGLQGKSQFRTIAPKLAPQVLAPRVLPGPAPSLSDHAHPGPSLSSKALGMPPQNYALMQVAGQEGTFSLVALPHVASAQPLQKPRLPLPKNLKLPIPRYQRPGHSKGARKKPGFSSSDRGCSQAPAQTQAAPPLPEHPEAPHKPSQPKPALAPSQAPASLTNGGGHGDPGPPGTSDHGGRDPPAAPALSTPEEPSAERGLPKSSGRAGVAGKKPSRKPTVSRGELREQVDLARAASHLSPGVTGNAVQVVSSIPGGKVPILPYSRTRASQVYKGGAAVNLEDVSLSGLRAAGDKTSSVLEGFCSAPQVADRGPAPQASRQSPCDRAYCPATKADLNHKTKPNGGAAKRRGRKRKVPDELLTFQGKRRKCVISKCKDGKERAKADPQESRDQKPGVVKKYRSIMPKPVLVLPALAPLASPAATLQPPAPSSRGHASFNHSLAPKHPGCRPDEGPSPKPSSTFRNGFSGLKKPWHGCHVCEHAFQPKQHLREHANTHADSRPYSCRLCRKAYVRPGSLSAHVRLHHGDSRPRRLVCCEFCAKVFGHVRVYFGHLKEAHGVAVSTEPQPQPQPGDLLRTREQTARGMEGPVDRETKSSLEEDLLLNQADEVKFQIRCGRCQITAQSFAEIKFHLLYVHGEEIQGQLQEEISPSLGSRGAQGELVPQAAPFWKHPERRKQLKHRPLDGELCAVPRLKKQLYLRHQNDVEILAKHEGAQPGPSEPGGHPQGPEGPGPDAALSPPQPGFNCVLCAQTLGRREELLLHWEEQHRCQDPPTLWKLLSSLSSQGAAQRSGQSGK*