Sequence detailsbmy_13219 (Coding sequence)

Part of scaffold_842 (SequenceType object (1))

For more information consult the page for scaffold_842 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FUBP1ENSTTRG00000000096 (Bottlenosed dolphin)

Gene Details

far upstream element (FUSE) binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000088, Bottlenosed dolphin)

Protein Percentage 99.84%
cDNA percentage 99.05%
Ka/Ks Ratio 0.03877 (Ka = 0.0014, Ks = 0.0374)

BT.19933ENSBTAG00000008926 (Cow)

Gene Details

far upstream element-binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011751, Cow)

Protein Percentage 98.13%
cDNA percentage 96.32%
Ka/Ks Ratio 0.08724 (Ka = 0.0118, Ks = 0.1347)

Additional orthologs identified in other species via the OPTIC pipeline.

FUBP1 (Human)   Fubp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1989 bp    Location:148720..179549   Strand:+
Raw sequence 
>bmy_13219
ATGGCAGATTATTCAACAGTGCCTCCACCCTCCTCTGGCTCAGCTGGTGGTGGAGGCGGCGGCGGTGGTGGTGGAGGAGTTAACGATGCTTTCAAAGATGCGCTGCAGAGAGCCCGGCAGATTGCAGCAAAAATTGGAGGTGATGCTGGTACATCACTGAATTCTAATGACTATGGTTATGGGGGACAAAAAAGACCTTTGGAAGATGGAGATCAGCCAGATGCTAAGAAAGTTGCTCCTCAAAATGACTCTTTCGGAACACAGTTACCACCGATGCATCAGCAGCAAAGCAGGTCTGTAATGACAGAAGAATACAAAGTTCCAGATGGGATGGTTGGATTTATAATTGGCAGAGGAGGTGAACAGATCTCACGCATACAACAGGAATCTGGATGCAAAATACAGATAGCTCCTGACAGTGGTGGCCTTCCAGAAAGATCAGCAAAACGGTTACTGGACCAGATTGTTGAAAAAGGAAGACCAGCCCCTGGCTTCCATCATGGTGATGGGCCAGGAAATGCGGTTCAAGAAATCATGATTCCAGCTAGCAAAGCAGGATTAGTCATTGGAAAGGGGGGAGAGACTATTAAACAACTTCAGGAACGGGCTGGAGTTAAAATGGTTATGATCCAAGATGGACCTCAGAACACTGGTGCTGACAAACCTCTTAGGATTACAGGGGACCCATACAAAGTTCAACAAGCCAAGGAAATGGTGTTAGAATTAATTCGTGATCAAGGTGGTTTCAGAGAAGTTCGAAATGAGTATGGGTCAAGAATAGGAGGAAATGAAGGAATAGATGTCCCCATTCCAAGATTTGCTGTTGGCATCGTAATAGGAAGAAATGGAGAGATGATTAAAAAAATACAAAATGATGCTGGTGTTCGAATTCAGTTTAAGCCAGATGACGGAACAACACCAGATAGAATAGCACAAATAACAGGACCTCCAGACCGATGTCAACATGCTGCAGAAATTATTACAGACCTTCTTCGAAGTGTTCAGGCTGGTAATCCTGGTGGCCCTGGACCTGGTGGTCGAGGAAGAGGTAGAGGTCAAGGCAACTGGAACATGGGACCACCTGGTGGACTACAGGAATTTAATTTCATTGTACCAACTGGGAAAACTGGATTAATAATAGGAAAAGGCAATAGAAATTACTGTGCTTTGATTTTAGGAGGTGAAACCATAAAAAGCATAAGCCAACAGTCTGGTGCAAGAATAGAACTTCAGAGAAATCCTCCACCTAATGCAGATCCTAATATGAAGTTATTTACAATTCGTGGAACTCCACAGCAAATAGACTATGCTCGGCAACTCATAGAAGAAAAGATTGGTGGCCCAGTAAATCCTTTAGGGCCACCTGTACCCCATGGGCCCCATGGTGTCCCAGGCCCCCATGGGCCTCCTGGGCCCCCTGGGCCTGGAACTCCAATGGGACCATATAACCCTGCACCTTATAATCCGGGACCACCTGGCCCTGCTCCTCATGGTCCTCCAGCCCCTTATGCTCCCCAGGGGTGGGGAAATGCGTATCCACATTGGCAGCAACAGGCCCCTCCAGATCCAGCTAAAACAGGAACAGATCCAAATTCAGCAGCTTGGGCTGCTTATTATGCTCACTATTATCAACAACAAGCACAGCCACCGCCTGCAGCTCCTGCCGGTGCACCAACTACAACCCAAACCAATGGACAAGGAGATCAGCAGAATCCAGCTCCAGCTGGACAGGTTGATTATACCAAGGCTTGGGAAGAGTACTACAAGAAAATGGGTCAACAAGGGCAGACACAAGATTATTCAAAGGCTTGGGAGGAATATTACAAGAAGCAAGGTCAAGCAGTTCCTGCCCCTACTGGTGCTCCACCAGGTGGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTACTATAGACAACAAGCAGCCTACTACGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGGCCAATAA

Related Sequences

bmy_13219T0 SequenceType object (3)

Length: 663 aa      View alignments
>bmy_13219T0
MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGNRNYCALILGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQQGQTQDYSKAWEEYYKKQGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ*