Sequence details bmy_13232 (Coding sequence)

Part of scaffold_858 (Scaffold)

For more information consult the page for scaffold_858 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNIH4 ENSTTRG00000001640 (Bottlenosed dolphin)

Gene Details

cornichon homolog 4 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001545, Bottlenosed dolphin)

Protein Percentage 69.89%
cDNA percentage 76.34%
Ka/Ks Ratio 0.76422 (Ka = 0.2828, Ks = 0.37)

CNIH4 ENSBTAG00000019471 (Cow)

Gene Details

Protein cornichon homolog 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025936, Cow)

Protein Percentage 98.26%
cDNA percentage 95.07%
Ka/Ks Ratio 0.05417 (Ka = 0.0088, Ks = 0.1621)

CNIH4  (Minke Whale)

Gene Details

cornichon family AMPA receptor auxiliary protein 4

External Links

Gene match (Identifier: BACU018509, Minke Whale)

Protein Percentage 59.3%
cDNA percentage 72.09%
Ka/Ks Ratio 0.82386 (Ka = 0.3663, Ks = 0.4446)

Additional orthologs identified in other species via the OPTIC pipeline.

CNIH4 (Human)   Cnih4 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 492 bp    Location:314516..297134   Strand:-
Raw sequence 
>bmy_13232
ATGCCGCGTCCCGGCGGAGGGGACTGTGTTGCCCCAACAAGCAGGGGCAAGGGCCTATCAGGGGGCAGGCCGGGGCGGGGCGGGGCTGGTCAGGGCACCAGAGCCAGTTTGACGGAAGGAGCGGCGCGGCTGTGGCGGAGGAGAATGGAGGCGGTGGTGTTCGTCTTCTCTCTCCTTGACTGTTGTGCGCTTATCTTCCTCTCAGTGTACTTCATAATTACATTGTCTGATTTAGAATGTGATTACATTAATGCTAGATCATGTTGCTCGAAATTAAACAAGTGGGTAATTCCAGAATTGGTTGGCCATACTGTTGTCACTGTGTTCATTATGGTGCCAAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACCTGCTCTGTTTCTTCATGTATCTTTATAGTATGATTTTAGCTTTGATAAATGACTGA

Related Sequences

bmy_13232T0 Protein

Length: 164 aa      View alignments
>bmy_13232T0
MPRPGGGDCVAPTSRGKGLSGGRPGRGGAGQGTRASLTEGAARLWRRRMEAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELVGHTVVTVFIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLGFHLLCFFMYLYSMILALIND*