Part of scaffold_858 (Scaffold)

For more information consult the page for scaffold_858 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPN2 ENSTTRG00000004522 (Bottlenosed dolphin)

Gene Details

calpain 2, (m/II) large subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004259, Bottlenosed dolphin)

Protein Percentage 95.32%
cDNA percentage 96.32%
Ka/Ks Ratio 0.17563 (Ka = 0.0174, Ks = 0.0993)

CAPN2 ENSBTAG00000012778 (Cow)

Gene Details

Calpain-2 catalytic subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044733, Cow)

Protein Percentage 95.99%
cDNA percentage 93.59%
Ka/Ks Ratio 0.05389 (Ka = 0.0181, Ks = 0.3367)

CAPN2  (Minke Whale)

Gene Details

calpain 2, (m/II) large subunit

External Links

Gene match (Identifier: BACU001678, Minke Whale)

Protein Percentage 90.16%
cDNA percentage 92.97%
Ka/Ks Ratio 0.37761 (Ka = 0.0591, Ks = 0.1564)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1797 bp    Location:715657..690743   Strand:-
>bmy_13239
GGTGACTGCTGGCTGCTGGCAGCCATTGCCTCCCTCACCTTGAATGAAGAAGTCCTGGCTCGGGTCGTCCCCTTGGACCAGAGCTTCCAGGAGAACTACGCGGGGATCTTCCACTTCCAGTTCTGGCAGTACGGCGAGTGGGTGGAGGTGGTGGTGGACGACAGGCTGCCCACCAAGGACGGGGAGCTGCTCTTCGTGCACTCGGCAGAGGGCAGCGAGTTCTGGAGCGCGCTGCTGGAGAAGGCCTACGCCAAGATCAATGGGTGTTACGAAGCACTCTCGGGGGGTGCCACCACTGAGGGCTTCGAGGACTTCACCGGAGGCATCGCCGAGTGGTATGAGTTAAGGAAGGCCCCTCCCAACCTGTTCAGGATCATCCAGAAGGCTCTGCAGAAAGGCTCTCTCCTTGGCTGCTCCATCGATATCACCAGTGCTGCAGACTCGGAGGCCATCACCTTCCAGAAGCTGGTGAAGGGGCACGCGTACTCGGTCACTGGCGCCGAGGAGGTGGAAAGCAGCGGAAGCCTGCAGAAGCTGATCCGCATCCGGAATCCCTGGGGAGAGGTGGAGTGGACCGGGCAGTGGAACGACAACTGCCCAAACTGGAACACTGTTGACCCAGAGGTGAGGGAAAGGCTGACCAGACAGCATGAAGATGGGGAATTCTGGATGTCTTTGAACGACTTCCTGAGGCACTATTCCCGCCTGGAGATCTGCAACCTGACCCCTGACACGCTGACCAGTGACGCCTACAAGAAGTGGAAACTCACCAAGATGGATGGGAACTGGAGGCGGGGCTCCACCGCGGGCGGCTGCCGGAACTTCCCAAATACCTTCTGGATGAACCCTCAGTACCTGATCAAGTTGGAGGAGGAGGACGAGGACCAGGAGGACGGGGAGAACGGCTGCACCTTCCTGGTGGGTCTCATCCAGAAGCACCGGCGGCGGCAGAGAAAGATGGGCGAGGACATGCACACCATTGGCTTCGGCATCTATGAGGTATGGGAGCAGTTCACAGGACAGACCAACATCCACCTGAGCAAGAACTTCTTCCTGACGCACCGAGCGAGGGAGCGGTCGGACACCTTCATCAACCTGCGGGAGGTGCTCAACCGCTTCAAGCTGCCCCCGGGGGAGTACATCCTGGTGCCGTCCACCTTCGAGCCCAACAAGGACGGGGACTTCTGCATCCGGGTCTTTTCCGAGAAGAAAGCCGACTACCAAGTCGTCGACGATGAAATCGAGGCCAACCTTGAAGAGATTGATGTCAGCGAGGACGACRTCAATGATGGATTCAGGAGGCTGTTTGYCCAGTTGGCAGGGGAGGATGCAGAGATCTCTGCCTTTGAGTTGCAGACAATCCTGAGAAGAGTTCTGGCAAAGCGCCAAGATATCAAGTCAGACGGCTTCAGCATAGAGACCTGCAAAATCATGGTTGACATGCTCGACTCGGATGGGAGTGGCAAGCTGGGCCTGAAGGAGTTCTACGTTCTTTGGACCAAGATTCAGAAATACCAAAAAATTTACCGGGAAATCGACGTGGACAGGTCCGGAACCATGAACTCCTATGAGATGCGGAAAGCATTAGAAGAAGCAGGTTTCAAGATGCCCTGTCAGCTCCACCAAGTCATCGTTGCTCGGTTCGCAGACGACCAGCTCGTCATCGATTTTGACAATTTTGTCAGGTGTTTGATTCGCCTGGAAACACTATTCAGGATATTTAAGCAGCTGGACCCCGAGGATACTGGTATGATCCAGCTCGACCTTATCTCTTGGCTGTGTTTTTCAGTACTTTGA

Related Sequences

bmy_13239T0 Protein

Length: 599 aa      View alignments
>bmy_13239T0
GDCWLLAAIASLTLNEEVLARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELRKAPPNLFRIIQKALQKGSLLGCSIDITSAADSEAITFQKLVKGHAYSVTGAEEVESSGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRERLTRQHEDGEFWMSLNDFLRHYSRLEICNLTPDTLTSDAYKKWKLTKMDGNWRRGSTAGGCRNFPNTFWMNPQYLIKLEEEDEDQEDGENGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVWEQFTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVFSEKKADYQVVDDEIEANLEEIDVSEDDXNDGFRRLFXQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYVLWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLVIDFDNFVRCLIRLETLFRIFKQLDPEDTGMIQLDLISWLCFSVL*