Part of scaffold_836 (Scaffold)

For more information consult the page for scaffold_836 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMD8 ENSTTRG00000010617 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010062, Bottlenosed dolphin)

Protein Percentage 99.0%
cDNA percentage 98.22%
Ka/Ks Ratio 0.05215 (Ka = 0.0042, Ks = 0.08)

BT.91216 ENSBTAG00000031641 (Cow)

Gene Details

26S proteasome non-ATPase regulatory subunit 8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042312, Cow)

Protein Percentage 98.31%
cDNA percentage 95.48%
Ka/Ks Ratio 0.02532 (Ka = 0.007, Ks = 0.2751)

PSMD8  (Minke Whale)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 8

External Links

Gene match (Identifier: BACU008344, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.15%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0488)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 903 bp    Location:292934..286890   Strand:-
>bmy_13256
ATGTTCCTTAAAAGCCGGGCTCCGAGGGCACCTCCCCGAGAGCGACTGAACGCTAACCCCGGCAGGCGGAGGCAGACAGTCGCAGCCCCGCCTCCGGCTTTGGGCTCCACCTCTCGGCCCCACTTCCGCCGGGCGAGGCGATGTAGGCGTCGCTGCCGTAAATCGGGCGGGCGGTTTGCCGCATCACGGAAGATGGCGGCCGCGGCGGTGAACGGGGTGGCGGGAGCCTCGAGCTCGGGGCCTGCGGCGGCCTCGGGCGCAGTCCTGCAGGCCGCGGCCGGCATGTACGAGCAACTCAAGGGCGAATGGAACCGTAAAAGCCCCAATCTTAGCAAGTGCGGGGAAGAGCTCGGCCGTGACATCCTGGAGATCGGGGCCCAGTGGAGTATCCTACGCAAGGACATCCCCTCCTTCGAGCGGTACATGGCCCAGCTCAAATGCTATTACTTCGATTACAAGGAGCAGCTCCCGGAGTCAGCCTACATGCACCAGCTCTTGGGCCTCAACCTCCTCTTCCTGCTGTCCCAGAACCGGGTGGCTGAGTTCCACACAGAGTTGGAGCGTCTGCCTGCCAAGGACATCCAGACCAATGTATACATCAAGCATCCGGTGTCCCTCGAGCAATACCTGATGGAGGGCAGCTACAACAAGGTGGATGAGATTGCTGGGTGCATCGAGAAGGCCTATGAAAAAATCCTCTTCACTGAGGCCACCCGGATCCTCTTCTTCAACACACCCAAAAAGATGACAGACTACGCCAAGAAGCGAGGGTGGGTCCTGGGCCTCAACAACTACTACAGCTTTGCCAGCCAGCAGCAGAAGCCAGAAGATACCACCATCCCCTCCACGGAGCTGGCCAAACAGGTCATCGAGTATGCCCGGCAGCTGGAGATGATCGTCTGA

Related Sequences

bmy_13256T0 Protein

Length: 301 aa      View alignments
>bmy_13256T0
MFLKSRAPRAPPRERLNANPGRRRQTVAAPPPALGSTSRPHFRRARRCRRRCRKSGGRFAASRKMAAAAVNGVAGASSSGPAAASGAVLQAAAGMYEQLKGEWNRKSPNLSKCGEELGRDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLGLNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV*