Sequence detailsbmy_13257 (Coding sequence)

Part of scaffold_836 (SequenceType object (1))

For more information consult the page for scaffold_836 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CATSPERGENSTTRG00000010607 (Bottlenosed dolphin)

Gene Details

catsper channel auxiliary subunit gamma

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010060, Bottlenosed dolphin)

Protein Percentage 94.36%
cDNA percentage 95.89%
Ka/Ks Ratio 0.27771 (Ka = 0.0292, Ks = 0.1053)

CATSPERGENSBTAG00000000621 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000821, Cow)

Protein Percentage 89.27%
cDNA percentage 91.26%
Ka/Ks Ratio 0.17926 (Ka = 0.054, Ks = 0.3012)

CATSPERG (Minke Whale)

Gene Details

catsper channel auxiliary subunit gamma

External Links

Gene match (Identifier: BACU008345, Minke Whale)

Protein Percentage 98.35%
cDNA percentage 98.71%
Ka/Ks Ratio 0.17958 (Ka = 0.0066, Ks = 0.0368)

Additional orthologs identified in other species via the OPTIC pipeline.

CATSPERG (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 3420 bp    Location:329794..300998   Strand:-
Raw sequence 
>bmy_13257
ATGTCCCCTGCTGGCCCTGAGTGGCCGAGGCTCCGAGTCCTGCAGGCGCTGTGGGCACTGCTGGTGGTGCTGTTGGCACCGTGGAGGTTGTGGGCGATAAAGAATACCCAGGAGTGCACCTGGCAAGTTGTCCTGAACAACTTTGAGACAGTAGGCAAGAAGGACGCGAGCGATCGTTTCGTCGATCAAGAGCCCTTGTACACAGTGGACAAAGTGTTCAGCCTGCTAGTGGACGCGCCCATCGACCCGGACGAGTCCTCTGAGGCCCTGGTCCGCAAGGGCCACCTGACGGGGCTGAAGCCGGTGGTGCTGGTCACCTTCCAATCTCCAGTCAACTTCCATCGCTGGAAGATAGAGCAGCTGCAGATCCAGATGGAGGCAGCCCCCTTCCGCAGCAGAGCAGAGAGGTGTAATGCAGAGGAGGTGTGTCTCATGAGCTGGTACACACCCATGCCCATCAAGAACGGCAGCGTGGTCATGCGCGTGGACGTTAGCAGCAACGGCCTGGGGCCCTTCATTCCCAATAAAAGGTTTCAGGTGAATATCAACGGCTTCCTGGAGAGACAGCGAGACACCACACTCCAATTCACGGTGGGAAATGAGCTCTTCAATCTGATACCCCGGTACTTTGTGAATGTCCCGTCGAGGCCCCTGTGGTACACTGTGGACCAGACACCTGTGTTCATCCTGGGCGGCATCCGTGAGGAGAAGGCCATCCTGCTGACTGACACAAACTTCAAGGACTTCTTTCTCGTGGAGTTGAGCATTGACAGTTGCTGGGTAGGCTCCTTCTACTGCCCCCAGACCAGCTTCACTGCTACCATCTTCGAYGCCATCGCCACCGAGAGCACCCTCTTCATTCGGCAGAACCAGCTCGTCTACTATTTCACGGGCACCTATACCACACTCCACGAAAGCAACCGTGGCAGCGAGAGATGGGTTCGTGTCCTGGCTAACGAGTGCATCAAGAAGTTGTGCCCTGTGCATTTCCATAGCAATGGCTCCGAGTATGTCATGGCCCTCACCACTGGCAAGCACGAAGGTTACGTCCACTTTGGGACCATCACAGATGGCCGCGTGTCCTTCGAGTTGCTGCCCAGGCAGCGGTCCGTGTGCAATGGGATACTAGTTGTCAACTGCTCCATAACCTGGGCCGTATTCATTGCTGGTGACTACAATCTACTGCTGCTGGTGGAGATCGAAGACCCCTCCACCAGGAAGTATTTCCAGGTGGTCAGCTATGACCTGGTCAGTGATTACCTGGTTGTCCTCTACACCATCCCGGAATTCATCCCTGACGCTCGAGGCCTGGAGTTCCTGATGATCCTAGGGACAGAGTCTTACACCAACTTCCCGATGGTACCCAAGGGCATGTCCTACAACCCGTATAACAACCTGCTGTTCATCTGGGGCAACTTCCTCCTGCAGGGCTATAACAGTGAAAACTTCATCTACCTGGCGGACTTCCCCAAAGAGCTGTCCATCAAGTACCTGGTCAACTCGTTCTATGGGGACACRGCTATTGTCACAGAGACTGAGGAGATCTGGTACCTCCTGGAGGGTAGCTACCAGGTGTACAAGCTGTTCCCGTCCAAGGGCTGGGAGGTGCATGTCAGCCTACAGATGATGCAGCAGTCCTCTCTCTACGCCCCCAATGAGACCATGGTCACCCTCTTCTACGAAGACAACAAACTGTACCAGCTGGTGTACCTTATAGACAACCAGCAGGGCAGGCTCGTCAAGAGGCTTGTGCCTGTGGAGCAGCTTCTGATGTACCAGCAGATCAGCAACGACTACCTCTTGGAACGGCAAGGGAGCCACCTGACGCTCTCCTTTACCAACTTCTGCCCCTTCACGGTGATGCGTCTGCGGGACCTGCCCAACCCGCAGATCTACACGCGCCAGGAGCGCTACCGGGCGCAGCCGCCGCGTGTCTTGGAGCCCTGGGGCTTTCACAGCGAAAACTCGCTCGCTGTCTATCAGGGCCTCGTCTACTACCTGCTTTGGCTGCACTCGAAGTATGACAAGCCATATGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGAAGAACAAGAAGCAGGACCAGGATTACTACTTCTACCTGGCCAGCAACTGGCGGAGCGCGGGCAGTGTGCACGTTGACATGGCCAGCTACGAAAAGATCTACGACCTTAAGGCTGAGAACGAGCTGCCCGAGCGCATCTTCCTGGACAAGGGCACCAGCTACCGCTTCTCGGTCTTCCTGACCGCCCGGGAGCCGGAGCCCGTGCACGGCGCCTCCTTCCAGGTGCAGAGCCAGGTGGGCCTGGCTGTGGTGCTGGCCGACCCGGGCTGCATCGAGGCTGTGGTGAAGGAGAAGGTCCTTGTTAATCGCAACTCGGTGCTTTTCTGGGTTACGCTCAGTGATAAAAGGTTTTGCTTTGATCAGGGCATTAGTGGACATCACCTCATGAAAACCTCCATGCTTGTCAAGGTGGTGGGCTCGTCCGGGCACTGCTTCCAGAACACGCACCAGGGGCCCCGCATGCAAGGCAACCTGGTGGTGCCAGTGCTTATCGGCTGCCCCCCAGGCAAGCGCCTTGCCTTTGACATCACCTACACCCTGGAGTACAACCGCCTGCAGAACAAACGCTACTTTGACTGCGTGCACGTCGACCCCGAGATGCCCTGTTTCCTCTTCCGCGACGTCTTCTACCCGTTCTTCTTGATCCAAGATTTGGTGACGGGAGATTCTGGCAGTTTTCAGGGCAGCTACGTACTGAAGGTGGTGGGCGGCGGGCCCACCCTGGACACCATCAAGGAATACAGCGAGGAGGATATCTACCGCTTCAACAGCCCTCTGGACAAGACTGACAGCCTCATCTGGACCACAAGAAACACAACGACCACCGAGGACTCAGCCTTCAATATTCTGTCCCACAACAGTTTAGGCATTGAGTGGCTCTGTCTGGAGAACTCCCCATGCCATGACACCATTCCGCACAGCATCTTTGCCTCCGAGTTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGTGTGGACAAGAGCACATACTGCGACTACCAGCTCACCTTCCTGCTGCACATCCATGGGCTCCCACTCAGTGCCAGGCGGGCCTTCCTCATCCTCATGGTGTCAGCCAGCCTGTTTGTTGGTCTGGTGATCCTCTACATCATCTCCTGCCTCCTGTCGCCCTACGTGGTGAAGGTCTGCAACATCCTCTGCTGGAAGATCAACAACATCATTGCCTGGGAATCTTACACCTACAGTACCRCCTCCGACACCAGGGCCTTCAGCAACACCTCTGGGACCAAATCTGGGGAGAGCTCTGGGGGCATCTCCAGAGTTTTCTCCAAGGTGGCAGAGGAGAACAAGACTGACACTAAGGAAACCTTGAGGAAGAAGTCAATATCCTGA

Related Sequences

bmy_13257T0 SequenceType object (3)

Length: 1140 aa      View alignments
>bmy_13257T0
MSPAGPEWPRLRVLQALWALLVVLLAPWRLWAIKNTQECTWQVVLNNFETVGKKDASDRFVDQEPLYTVDKVFSLLVDAPIDPDESSEALVRKGHLTGLKPVVLVTFQSPVNFHRWKIEQLQIQMEAAPFRSRAERCNAEEVCLMSWYTPMPIKNGSVVMRVDVSSNGLGPFIPNKRFQVNINGFLERQRDTTLQFTVGNELFNLIPRYFVNVPSRPLWYTVDQTPVFILGGIREEKAILLTDTNFKDFFLVELSIDSCWVGSFYCPQTSFTATIFDAIATESTLFIRQNQLVYYFTGTYTTLHESNRGSERWVRVLANECIKKLCPVHFHSNGSEYVMALTTGKHEGYVHFGTITDGRVSFELLPRQRSVCNGILVVNCSITWAVFIAGDYNLLLLVEIEDPSTRKYFQVVSYDLVSDYLVVLYTIPEFIPDARGLEFLMILGTESYTNFPMVPKGMSYNPYNNLLFIWGNFLLQGYNSENFIYLADFPKELSIKYLVNSFYGDTAIVTETEEIWYLLEGSYQVYKLFPSKGWEVHVSLQMMQQSSLYAPNETMVTLFYEDNKLYQLVYLIDNQQGRLVKRLVPVEQLLMYQQISNDYLLERQGSHLTLSFTNFCPFTVMRLRDLPNPQIYTRQERYRAQPPRVLEPWGFHSENSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYLASNWRSAGSVHVDMASYEKIYDLKAENELPERIFLDKGTSYRFSVFLTAREPEPVHGASFQVQSQVGLAVVLADPGCIEAVVKEKVLVNRNSVLFWVTLSDKRFCFDQGISGHHLMKTSMLVKVVGSSGHCFQNTHQGPRMQGNLVVPVLIGCPPGKRLAFDITYTLEYNRLQNKRYFDCVHVDPEMPCFLFRDVFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLDTIKEYSEEDIYRFNSPLDKTDSLIWTTRNTTTTEDSAFNILSHNSLGIEWLCLENSPCHDTIPHSIFASEFFFKVLVSNRGVDKSTYCDYQLTFLLHIHGLPLSARRAFLILMVSASLFVGLVILYIISCLLSPYVVKVCNILCWKINNIIAWESYTYSTXSDTRAFSNTSGTKSGESSGGISRVFSKVAEENKTDTKETLRKKSIS*