Sequence detailsbmy_13269 (Coding sequence)

Part of scaffold_854 (SequenceType object (1))

For more information consult the page for scaffold_854 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NEDD4ENSTTRG00000008042 (Bottlenosed dolphin)

Gene Details

neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007627, Bottlenosed dolphin)

Protein Percentage 82.97%
cDNA percentage 85.19%
Ka/Ks Ratio 0.57855 (Ka = 0.0857, Ks = 0.1481)

NEDD4ENSBTAG00000013793 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018331, Cow)

Protein Percentage 92.5%
cDNA percentage 92.83%
Ka/Ks Ratio 0.26997 (Ka = 0.0484, Ks = 0.1794)

NEDD4 (Minke Whale)

Gene Details

neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase

External Links

Gene match (Identifier: BACU016382, Minke Whale)

Protein Percentage 94.58%
cDNA percentage 95.65%
Ka/Ks Ratio 0.60503 (Ka = 0.0398, Ks = 0.0658)

Genome Location

Sequence SequenceType object (2)

Length: 2505 bp    Location:111536..170179   Strand:+
Raw sequence 
>bmy_13269
ATGTGTAAAATAAGCAGGTCACAGTACAGAACTATTAGTGATCTCTACAGAAGAATCATGACATTTGCACATAGAAAATTTGAAAGCAGCTGTGTGAAGACAGTAGTTATTGAGCAAGAAACAGAAATTCATATCTTTAGAATATTGGAAAAAACAAGAGATGATTTCCTAGGTCAAGTGGATGTTCCTCTTTATCCATTACCGACAGAAAATCCAAGAATGGAGAGACCATATACATTTAAGGATTTTGTTCTTCACCCAAGAAGTGGCTCAGAAGAAGATAACACAGAACAGGCTGAGGAATTAGAGCCTGGCTGGGTGGTTTTGGACCAACCAGATGCTGCTTGCCATTTGCAGCAGCAACAAGAACCTTCCCCTCTACCTCCAGGATGGGAAGAGAGGCAGGATATTCTTGGAAGGACCTACTATGTAAACCATGAATCCAGAAGAACACAGTGGAAAAGACCAACCCTTCAGGACAACCTAACAGATGCTGAGAATGGTAACATTCAACTGCAAGCCCAGCGTGCATTCACCACCAGGCGGCAGATATCTGAGGAAACAGAAAGTGTTGACAGCCGAGAGTCTTCCGAGAACTGGGAAGTTATAAGAGAAGATGAAGCCACCATGTACAGCCATCAGGCCTTCCCCTCATCTCCACCATCAAATAACTTGGATGTCCAGACTCATCTTGCAGAAGAATTGAATGCCAGACTCACTGTTTATGGAAATTCAGCCACTGGCCAGCCAGTATCCAGCTCAAATCATTCCAGCAGAAGAGGCAGCTTACAAGCCTATACTTTTGAGGAACAGCCTACACTTCCTGTGCTCTTGCCTACTTCATCTGGATTACCACCAGGTTGGGAAGAAAAACAAGATGAAAGAGGAAGATCATATTACGTGGATCATAATTGCAGAACTACTACCTGGATAAAGCCCACTGCACAGGCCACAGTGGAGACCAGTCAGCTGCCGTCAAGCCAGGGTTCTTCTGCAGGCCCTCACCCACAGGCCCCCACGAGTGACGCAGCACAGCAGGTGACCCAGCCATCTGAAGTGGAGCAAGGATTCCTTCCCAAAGGCTGGGAAGTCCGGCATGCACCAAACGGGAGGCCTTTCTTCATTGACCACAACACCAAAACCACCACCTGGGAAGATCCAAGACTGAAAATTCCAGCTCATGTGAGAGGAAAGACATCACTTGATTCTTCCAATGACCTGGGGCCTTTACCTCCAGGATGGGAAGAAAGAACTCACACCGATGGAAGAATATTCTACATAAATCACAATATAAAAAGAACGCAATGGGAAGATCCTCGGTTGCAGAATGTAGCAATAACTGGACCAGCAGTGCCCTACTCCAGGGATTACAAAAGAAAGTATGAGTTCTTCCGAAGAAAGTTGAAGAAGCAGAATGACATTCCAAACAAATTTGAAATGAAACTTCGCCGTGCAACTGTCCTTGAGGACTCTTACAGGAGAATTATGGGGGTCAAGAGAGCAGACTTCCTCAAGGCTAGACTGTGGATTGAGTTTGATGGCGAAAAGGGACTAGATTATGGAGGAGTCGCCAGAGAATGGTTCTTTCTGATTTCGAAGGAAATGTTTAACCCTTATTATGGGTTGTTTGAATATTCTGCTACGGATAATTATACCCTACAGATAAATCCCAACTCTGGATTGTGTAATGAAGATCACCTCTCTTACTTCAAGTTTATTGGCCGGGTAGCTGGGATGGCAGTTTATCATGGCAAACTGTTGGATGGCTTTTTCATCCGACCATTTTACAAGATGATGCTGCACAAGCCAATAACACTTCATGATATGGAATCAGTGGATAGTGAGTATTACAATTCACTAAGATGGATTCTTGAAAACGATCCAACAGAACTGGACCTCAGGTTTGTCATAGATGAAGAACTTTTTGGACAGACCCATCAACATGAGTTGAAAAATGGCGGATCAGAAATAGTCGTCACCAATAAGAACAAAAAGGAATATATTTATCTTGTAATACAATGGCGATTTGTAAACCGAATCCAGAAGCAAATGGCTGCTTTTAAAGAGGGATTTTTTGAACTGATACCACAGGATCTCATCAAAATTTTTGATGAAAATGAACTAGAGCTTCTGATGTGTGGCTTGGGAGATGTCGATGTGAGTGACTGGAGAGAACACACAAAGTACAAAAATGGCTACAGTGTAAATCATCAAGTCATCCAGTGGTTTTGGAAGGCTGTTTTAATGATGGACTCAGAAAAAAGAATACGATTACTTCAGTTTGTCACTGGCACATCCCGTGTGCCTATGAATGGATTTGCTGAACTGTATGGCTCAAACGGACCACAGTCATTTACAGTTGAGCAGTGGGGCACCCCTGAGAAGCTGCCAAGAGCTCATACCTTTAATCGCTTGGACTTGCCACCGTATGAGTCATTTGAAGAATTATGGGATAAACTTCAGATGGCCGTTGAGAACACTCAGGGTTTTGATGGCGTTGATTAG

Related Sequences

bmy_13269T0 SequenceType object (3)

Length: 835 aa      View alignments
>bmy_13269T0
MCKISRSQYRTISDLYRRIMTFAHRKFESSCVKTVVIEQETEIHIFRILEKTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSGSEEDNTEQAEELEPGWVVLDQPDAACHLQQQQEPSPLPPGWEERQDILGRTYYVNHESRRTQWKRPTLQDNLTDAENGNIQLQAQRAFTTRRQISEETESVDSRESSENWEVIREDEATMYSHQAFPSSPPSNNLDVQTHLAEELNARLTVYGNSATGQPVSSSNHSSRRGSLQAYTFEEQPTLPVLLPTSSGLPPGWEEKQDERGRSYYVDHNCRTTTWIKPTAQATVETSQLPSSQGSSAGPHPQAPTSDAAQQVTQPSEVEQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIPAHVRGKTSLDSSNDLGPLPPGWEERTHTDGRIFYINHNIKRTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRRKLKKQNDIPNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLHKPITLHDMESVDSEYYNSLRWILENDPTELDLRFVIDEELFGQTHQHELKNGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVSDWREHTKYKNGYSVNHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQSFTVEQWGTPEKLPRAHTFNRLDLPPYESFEELWDKLQMAVENTQGFDGVD*