Sequence detailsbmy_13273 (Coding sequence)

Part of scaffold_854 (SequenceType object (1))

For more information consult the page for scaffold_854 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGBENSTTRG00000008523 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class B

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008080, Bottlenosed dolphin)

Protein Percentage 97.53%
cDNA percentage 98.22%
Ka/Ks Ratio 0.39951 (Ka = 0.0131, Ks = 0.0327)

PIGBENSBTAG00000012740 (Cow)

Gene Details

GPI mannosyltransferase 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016934, Cow)

Protein Percentage 87.61%
cDNA percentage 90.06%
Ka/Ks Ratio 0.51428 (Ka = 0.0887, Ks = 0.1725)

PIGB (Minke Whale)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class B

External Links

Gene match (Identifier: BACU019463, Minke Whale)

Protein Percentage 97.94%
cDNA percentage 98.9%
Ka/Ks Ratio 0.6883 (Ka = 0.0099, Ks = 0.0144)

Additional orthologs identified in other species via the OPTIC pipeline.

PIGB (Human)   Pigb (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1536 bp    Location:569379..541640   Strand:-
Raw sequence 
>bmy_13273
AGGCCAAACTTAGTGGGCGGAAGAGCAACGCGCGCTGCTTCAGCCACCCAGGGCTGGGGACAGTGGCGGCTGGCTGTCCCCAGCAGACCTCGAAGCAGATGCAGGATGGAGCGAGACGGCGGCGGCGGCAGCCTCTTTTTCCGTGGTCTCCAGAACCGCTCCCACGAGAAGATGAAGCTGCGAACGAGAAAGTCCACCTTGTACCTCAGCCAGCCGAAGAGCACTGGGCGCTGCGAAGATCTTCTTGGTGAAAACATTTATCTGGTCTTGTTTACCATAGCATTACGAATATGTAACTGCTTTTTAGTCCAGACAAGTTTTGTTCCAGATGAATACTGGCAGTCTCTTGAAGTTGCACATCACATGATTTGGATTCCTAGACTTGCCCAAGCACTTCTGTCTGCTATAGCAGACTTGAGGCTTTACTCATTAATGAAGCAACTAGAAAATCAGCAAGTGGCAAGATGGGTGTTATGCTCTTGGTTCACGTGGTATTGCTGTACCAGAACTCTTACAAACACCATGGAAACTGTTCTCACTGTAATTGCTCTTTTCTACTATCCTTTGGAAGGTTCAAAGTTTATGAACAGCGTCAAGTACTCATCCCTGGTGGCACTTGCCTTTATAATTCGTCCCACAGCTGTTATTCCGTGGATACCTTTGCTGTTCAGACATTTCTGGCAAGAACAGAGAAAGCTTGATCTTATTCTACATCAGTTTTTACCTTGGACTCTGGTTCAATATAATTTTTTGAAATTTAACGTGCTGCAGAATGTGGGATCATTTTATGGTTCTCATCCATGGCACTGGTACTTCAGTCAAGGATTTCCAGCTGTCCTGGGCACTCACTTACCCTTCTTTATTCATGGCTGCCTTCTAGCCCCAAAGAGGTACAGGATATTTTTGGTGACTGTGCTGTGGACACTGCTAGTTTATAGCATGTTGAGCCACAAAGAATTCAGGTTTATCTATCCAGTTTTACCATTTTGTATGGTGTTCTGTGGATACTCCCTAAACAACCTGAAATTGTGGAAGAAACCAGCTCTAAGTTTCCTGTTTTTATCAAATATGTTCTTTGCCCTCTATACTGGTTTAGTTCATCAACGAGGTACTCTTGATGTCATGACTAATATTCAAGAACTCTGTTACAACAATACAAATATATCTTCAGCTTCAGTACTTATGATGATGCCTTGTCACTCTACTCCTTATTATAGCCATGTCCATCACCCACTTCCAATGAGATTTCTCCAATGTCCCCCAGACCTGACTGGAAAAGGTGATTATCTTGTTGAAGCAGATATATTTTATCTAAATCCCTTAAAGTGGTTGTATAGAGAGTTTCAAAATGATTCAACACTGCCTACTCACTTGATCATCTTCAGCATCTTGGAGGAGGAAATAAATCCTTTCCTAATTTCAAACAAGTATGAGAGAACTGCTGTATTCTTCCACACTCACTTTCCGGAGCGTCGAACTGGAAGTCACATATACGTCTATGAACGGAAGTTAAAAGGGAAACTCAACCAAACATGA

Related Sequences

bmy_13273T0 SequenceType object (3)

Length: 512 aa      View alignments
>bmy_13273T0
RPNLVGGRATRAASATQGWGQWRLAVPSRPRSRCRMERDGGGGSLFFRGLQNRSHEKMKLRTRKSTLYLSQPKSTGRCEDLLGENIYLVLFTIALRICNCFLVQTSFVPDEYWQSLEVAHHMIWIPRLAQALLSAIADLRLYSLMKQLENQQVARWVLCSWFTWYCCTRTLTNTMETVLTVIALFYYPLEGSKFMNSVKYSSLVALAFIIRPTAVIPWIPLLFRHFWQEQRKLDLILHQFLPWTLVQYNFLKFNVLQNVGSFYGSHPWHWYFSQGFPAVLGTHLPFFIHGCLLAPKRYRIFLVTVLWTLLVYSMLSHKEFRFIYPVLPFCMVFCGYSLNNLKLWKKPALSFLFLSNMFFALYTGLVHQRGTLDVMTNIQELCYNNTNISSASVLMMMPCHSTPYYSHVHHPLPMRFLQCPPDLTGKGDYLVEADIFYLNPLKWLYREFQNDSTLPTHLIIFSILEEEINPFLISNKYERTAVFFHTHFPERRTGSHIYVYERKLKGKLNQT*