Part of scaffold_838 (Scaffold)

For more information consult the page for scaffold_838 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NEDD9 ENSTTRG00000013935 (Bottlenosed dolphin)

Gene Details

neural precursor cell expressed, developmentally down-regulated 9

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013211, Bottlenosed dolphin)

Protein Percentage 75.32%
cDNA percentage 76.78%
Ka/Ks Ratio 0.2386 (Ka = 0.0475, Ks = 0.199)

NEDD9 ENSBTAG00000006287 (Cow)

Gene Details

NEDD9 protein; Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055362, Cow)

Protein Percentage 80.63%
cDNA percentage 83.52%
Ka/Ks Ratio 0.14819 (Ka = 0.1108, Ks = 0.7479)

NEDD9  (Minke Whale)

Gene Details

neural precursor cell expressed, developmentally down-regulated 9

External Links

Gene match (Identifier: BACU005148, Minke Whale)

Protein Percentage 93.94%
cDNA percentage 95.77%
Ka/Ks Ratio 0.3097 (Ka = 0.0318, Ks = 0.1027)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2133 bp    Location:78599..68411   Strand:-
>bmy_13354
ATGCAGTGTGTAGATATGAAAATGCGAGCCTGTCGGGTGAGATTTGTGTCATTGACATTGGTTCCAGATGCTCGAGCTGTGATGAGTGTGATCACGCCGATGAGGACAGGCCACGGCTATGTGTACGAGTACCCATCCAGATACCAAAAGGACGTCTACGATGTTCCTCCTTCCCAGACCGCTCACGGGGTGTACGACATCCCACCGTCATCTGTGAAAGGCCCCGTGTTCTCAGTTCCAGTGGGGGAGATAAAACCTCAAGGGGTCTATGACATCCCTCCTACCAAAGGGGGATACGCCATTCCACCCCCTGCCTGCAGAGATGAGGCCGGGCTTATGGAGAAAGAGTACGACTTCCCCCCTCCCATGAGACACGCCGGCCGGCCCGACGGCAGACCCGAGGGCGTGTATGACATCCCCCCAGCCGGCACCAAGCCCCTGGGGAAGGACCTTCACGCTAAATGTAACGGCGATGCTGCAGGGGCAGCGGAGCTGGCGCCACGGAGACACCAGAGCATTTCCCTGAGCCACCCGGCCCCGCAGCTGGGCCAGCCCGGGGGCTCCCAGAACGACGCCTACGATGTCCCCCGGGGGGTCCAGTTTCTGGCACCGCCAGCAGAAACCAGCGAGAAAGCAAACCTCGAGGAAAGGGACGGGGTTTACGACGTGCCGCTGCGCTGCCCGCCGGACGCCAAAGGCTCCCCGGACGTGGTGGACGGCATCAACCGGCTGTCCTTCTCCAGCACCGGCAGCAGCCGGAGCACCATGTCCACGTCCTCCACCGCCTCCAAGGACTCTGCGCTGTCCGCCTCGCCGGCCCAGGGCAAAAGGCTCTTCCTGGACCCAGACACGGCCATCGAGAGGCTCCACCGGCTGCAGCAGGCCCTGGAGACGGGCGTCTCGGGCCTGAGGGCGCTGGTCACCACCGACTGGCGGGGCTACGGCTACATGGAGCGGCACGTCAACGAGGTCCGCGCCGCCGTCGACAGCGTGGAGCTGGCCCTGAGGGACTACCTGCACTTCGCCAGGGGCGCCGCGGCCAACGCCTCCCGCCTGCCGGAGCCGCTCCTCCACCACAAGGTGAGGCGGGAGCTCCAGCGGCTGGAGGACTCCCACCAGATCCTGAGCCAGACCAGCCACGACTTAAACGAGTGCAGCTGGTCCCTGAACGTGCTGGCCGTCAACAAGCCCCAGAACAAATGGGATGACCTGGACCGGTTCGTGATGGTGGCAAAGACGGTGCCAGACGATGCCAAGCAGCTGACCACGACCATCAACACCAACGCGGAGGCCCTCTTCAAGCCGGGCCCTGGCAGCTCGCATGGGAAGAGCGGGCCTGAGAGCATCACGAACTCCGCTGAGTGCCCACACGCCGGCTCCCAGGTACAGCTGCTGCATCCCGGGGACCACAAGGCTCCAGCCCTCAACAAGCCGCTGGCCCCAAGCCTGGGCAAGGACCAGCCCCCTGACTGTAGTAGCAGTGATGGCTCTGAACGGAGCTGGATGGATGATTACGACTATGTCCACCTCCAGGGTAAGGAGGAGTTTGAGAGACAACAGAAGGAGCTGCTGGAAAAAGAAAATATCATCAAACAGAACAAGATGCAGCTGGAACATCAYCAGCTGAGTCAGTTCCAGTTGCTGGAACAAGAAATCACAAAGCCCGTGGAGAACGACATCTCCAAGTGGAAGCCCTCCCAGAGCCTCCCAAGCACCAGCAGCGGCGTGGGCGCTCAGGACAGGCAGCTGCTGTGCTTCTACTACGACCAGTGTGAGACCCATTACATCTCCCTCCTCAACGCCATCGACGCTCTCTTCAGCTGCCTCAGCTCAGCACAGCCCCCGCGGATCTTCGTGGCGCACAGCAAGTTTGTCATCCTCAGCGCCCACAAACTGGTGTTCATCGGAGACACGCTGACAAGGCAGGTGGCCGCCCAGGACGTTCGCAACAAAGTGATGAACTCCAGCAACCAGCTCTGCGAGCAGCTCAAGACTATAGTTCTGGCGACCAAGACGGCCGCGCTCCATTACCCCAGCACCTCCGCCCTGCAGGAGATGGTCCACCAGGTGACGGACCTGTCCAGGAACGCGCAGCTCTTCAAGCGCTCTCTGCTGGAGATGGCGACATTCTGA

Related Sequences

bmy_13354T0 Protein

Length: 711 aa      View alignments
>bmy_13354T0
MQCVDMKMRACRVRFVSLTLVPDARAVMSVITPMRTGHGYVYEYPSRYQKDVYDVPPSQTAHGVYDIPPSSVKGPVFSVPVGEIKPQGVYDIPPTKGGYAIPPPACRDEAGLMEKEYDFPPPMRHAGRPDGRPEGVYDIPPAGTKPLGKDLHAKCNGDAAGAAELAPRRHQSISLSHPAPQLGQPGGSQNDAYDVPRGVQFLAPPAETSEKANLEERDGVYDVPLRCPPDAKGSPDVVDGINRLSFSSTGSSRSTMSTSSTASKDSALSASPAQGKRLFLDPDTAIERLHRLQQALETGVSGLRALVTTDWRGYGYMERHVNEVRAAVDSVELALRDYLHFARGAAANASRLPEPLLHHKVRRELQRLEDSHQILSQTSHDLNECSWSLNVLAVNKPQNKWDDLDRFVMVAKTVPDDAKQLTTTINTNAEALFKPGPGSSHGKSGPESITNSAECPHAGSQVQLLHPGDHKAPALNKPLAPSLGKDQPPDCSSSDGSERSWMDDYDYVHLQGKEEFERQQKELLEKENIIKQNKMQLEHHQLSQFQLLEQEITKPVENDISKWKPSQSLPSTSSGVGAQDRQLLCFYYDQCETHYISLLNAIDALFSCLSSAQPPRIFVAHSKFVILSAHKLVFIGDTLTRQVAAQDVRNKVMNSSNQLCEQLKTIVLATKTAALHYPSTSALQEMVHQVTDLSRNAQLFKRSLLEMATF*