Sequence details bmy_13398 (Coding sequence)

Part of scaffold_841 (Scaffold)

For more information consult the page for scaffold_841 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN13 ENSTTRG00000009870 (Bottlenosed dolphin)

Gene Details

tetraspanin 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009357, Bottlenosed dolphin)

Protein Percentage 99.22%
cDNA percentage 98.44%
Ka/Ks Ratio 0.07638 (Ka = 0.0037, Ks = 0.0483)

TSPAN13 ENSBTAG00000012805 (Cow)

Gene Details

Tetraspanin-13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017010, Cow)

Protein Percentage 100.0%
cDNA percentage 94.01%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2151)

TSPAN13  (Minke Whale)

Gene Details

tetraspanin 13

External Links

Gene match (Identifier: BACU000470, Minke Whale)

Protein Percentage 82.81%
cDNA percentage 83.33%
Ka/Ks Ratio 0.77259 (Ka = 0.1813, Ks = 0.2347)

Genome Location

Sequence Coding sequence

Length: 387 bp    Location:69943..39685   Strand:-
Raw sequence 
>bmy_13398
ATGGTTTGCGGGGGCTTCGCGTGTTCCAAGAACTGCCTGTGCGCGCTCAACCTACTCTACACATTGGTTAGTCTGCTGCTAATTGGAATTGCAGCGTGGGGCATCGGCTTCGGGCTGATTTCCAGTCTCCGGGTGGTCGGTGTGGTCATCGCGGTGGGCATCTTCTTGTTCCTGATTGCATTAGTGGGGCTGATCGGAGCCGTGAAACACCATCAGGTGTTGCTTTTTTTTTACATGATTATTCTCTTACTTGTATTTATTGTCCAGTTTTCCGTATCATGTGCTTGCTTAGCCCTGAACCAGGAGCAACAGATCCTGGGTGTTTGGCTGACCTACAGATACAGGAACCAGAAAGATCCTCGTGCTAATCCTAGTGCGTTCCTTTGA

Related Sequences

bmy_13398T0 Protein

Length: 129 aa      View alignments
>bmy_13398T0
MVCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNQEQQILGVWLTYRYRNQKDPRANPSAFL*