Sequence detailsbmy_13402 (Coding sequence)

Part of scaffold_841 (SequenceType object (1))

For more information consult the page for scaffold_841 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SOSTDC1ENSTTRG00000009838 (Bottlenosed dolphin)

Gene Details

sclerostin domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009309, Bottlenosed dolphin)

Protein Percentage 99.03%
cDNA percentage 99.03%
Ka/Ks Ratio 0.15441 (Ka = 0.0043, Ks = 0.028)

SOSTDC1 (Minke Whale)

Gene Details

sclerostin domain containing 1

External Links

Gene match (Identifier: BACU000473, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.79%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0137)

Additional orthologs identified in other species via the OPTIC pipeline.

SOSTDC1 (Cow)   SOSTDC1 (Human)   Sostdc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 621 bp    Location:311770..316125   Strand:+
Raw sequence 
>bmy_13402
ATGCTTCCTCCTGCCATTCATTTCTATCTCATTCCCCTTGCATGCGTCCTCATGAAAAGCTGTTTGGCTTTTAAAAATGATGCCACAGAAATCCTTTATTCACATGTGGTTAAACCTGTTCCAGCACAGCCCAGCAACAACAGCACGATGAATCAAGCCAGAAATGGAGGCAGGCATTTCAGTGACACTGGACTGGATCGGAACACTCGAGTTCAAGTAGGTTGCCGGGAACTGCGTTCCACCAAATACATCTCTGACGGCCAGTGCACTAGCATCAGCCCCCTGAAGGAGCTGGTGTGCGCTGGCGAATGCTTGCCCCTGCCTGTGCTCCCCAATTGGATCGGAGGAGGCTATGGAACAAAGTACTGGAGCAGGAGGAGCTCCCAGGAGTGGAGGTGTGTCAATGACAAAACGCGTACCCAGAGAATCCAGCTGCAGTGCCAAGATGGCAGCACGCGCACCTACAAAATCACGGTGGTCACCGCCTGCAAGTGCAAGAGGTACACGCGGCAGCACAATGAGTCCAGTCATAACTTCGAGAGCATGTCGCCTGCCAAGCCAGCCCAGCATCACAGAGAGCGGAAAAGAGCCAGCAAATCCAGCAAGCACAGCATGAGTTAG

Related Sequences

bmy_13402T0 SequenceType object (3)

Length: 207 aa      
>bmy_13402T0
MLPPAIHFYLIPLACVLMKSCLAFKNDATEILYSHVVKPVPAQPSNNSTMNQARNGGRHFSDTGLDRNTRVQVGCRELRSTKYISDGQCTSISPLKELVCAGECLPLPVLPNWIGGGYGTKYWSRRSSQEWRCVNDKTRTQRIQLQCQDGSTRTYKITVVTACKCKRYTRQHNESSHNFESMSPAKPAQHHRERKRASKSSKHSMS*