Part of scaffold_870 (Scaffold)

For more information consult the page for scaffold_870 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CRISPLD1 ENSTTRG00000006477 (Bottlenosed dolphin)

Gene Details

cysteine-rich secretory protein LCCL domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006130, Bottlenosed dolphin)

Protein Percentage 91.27%
cDNA percentage 92.68%
Ka/Ks Ratio 0.53344 (Ka = 0.0506, Ks = 0.0948)

CRISPLD1 ENSBTAG00000004411 (Cow)

Gene Details

cysteine-rich secretory protein LCCL domain-containing 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005784, Cow)

Protein Percentage 92.59%
cDNA percentage 90.92%
Ka/Ks Ratio 0.16347 (Ka = 0.0488, Ks = 0.2986)

CRISPLD1  (Minke Whale)

Gene Details

cysteine-rich secretory protein LCCL domain containing 1

External Links

Gene match (Identifier: BACU011160, Minke Whale)

Protein Percentage 94.44%
cDNA percentage 95.41%
Ka/Ks Ratio 0.59738 (Ka = 0.041, Ks = 0.0686)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1137 bp    Location:584137..565604   Strand:-
>bmy_13455
ATGCTTCCATCAAKTGGACAGAATTTGGGAGCACATTGGGGAAGATATAGGCCCCCAACATTTCAYGTACAAGCATGGTATGATGAAGTCAGAGACTTTAGCTACCCATATGAACATGAATGCAACCCGTATTGTCCATTCAGATGTTCTGGTCCTGTATGTACTCATTATACACAGGTGGTGTGGGCAACAAGTAGCAGAATAGGCTGTGCCATTAATTTGTGCCATAACATGAACATCTGGGGGCAGATATGGCCCAAAGCTGTCTACTTGGTGTGCAATTATTCCCCAAAGTGTATCATTGGTAATTTGTGCACATTTAAGATGGATTCATATTTCTTAAATCCATTCTCCCTAACAGAAGGATCAGATAGCTATTACCCTCCTCAAGAAGAAGAAACAAATGAAATTGAACGGCAGCAATCACAAGTCCATGACACCCACATCCGGACAATAGCAGATGATAGTAACAGAAACGAAGTCATAAGCACACAGCAAATGTCTCAAATCGTTTCTTGCGAAATAAGATTAAGAGACCAGTGCAAAGGCACAACCTGCAATAGATATGAATGCCCTGCTGGCTGTTTGGATAGTAAAGCTAAAGTTATTGGCAGTGTACATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAATTCATTATGGTATAATAGACAATGATGGTGGTTGGGTGGATATCACTAGACAAGGAAGAAAACATTATTTCATCAAATCCAATAGAAATGGTGTTCAAACAATTGGCAAGTATCAGTCTGCTAATTCCTTCACAGTCTCTAAAGTAACAGTTCAGGCGGTCACTTGTGAAACAACTGTGGAACAGCTCTGTCCTTTTCATAAGCCTGCTTCACATTGCCCAAGAGTATACTGTCCTCGGAACTGTATGCAGGCAAATCCACATTATGCTCGTGTAATTGGAACTCGAATTTATTCTGATCTGTCCAGTATCTGCAGAGCAGCTGTACATGCTGGCGTGGTTCAAAATCACGGGGGTTATGTTGACGTGATGCCTGTGGACAAAAGAAAGACTTACATTGCTTCTTTTCAGAATGGAATCTTCTCAGAAAGTTTACAGAATCCTCCAGGAGGAAAGGCATTCAGAGTATTTGCTGTTGTGTGA

Related Sequences

bmy_13455T0 Protein

Length: 379 aa      View alignments
>bmy_13455T0
MLPSXGQNLGAHWGRYRPPTFHVQAWYDEVRDFSYPYEHECNPYCPFRCSGPVCTHYTQVVWATSSRIGCAINLCHNMNIWGQIWPKAVYLVCNYSPKCIIGNLCTFKMDSYFLNPFSLTEGSDSYYPPQEEETNEIERQQSQVHDTHIRTIADDSNRNEVISTQQMSQIVSCEIRLRDQCKGTTCNRYECPAGCLDSKAKVIGSVHYEMQSSICRAAIHYGIIDNDGGWVDITRQGRKHYFIKSNRNGVQTIGKYQSANSFTVSKVTVQAVTCETTVEQLCPFHKPASHCPRVYCPRNCMQANPHYARVIGTRIYSDLSSICRAAVHAGVVQNHGGYVDVMPVDKRKTYIASFQNGIFSESLQNPPGGKAFRVFAVV*