Sequence details bmy_13457 (Coding sequence)

Part of scaffold_866 (Scaffold)

For more information consult the page for scaffold_866 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HDDC2 ENSTTRG00000002258 (Bottlenosed dolphin)

Gene Details

HD domain containing 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002110, Bottlenosed dolphin)

Protein Percentage 97.97%
cDNA percentage 98.65%
Ka/Ks Ratio 0.41059 (Ka = 0.0097, Ks = 0.0237)

HDDC2 ENSBTAG00000003340 (Cow)

Gene Details

HD domain-containing protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004334, Cow)

Protein Percentage 94.05%
cDNA percentage 93.15%
Ka/Ks Ratio 0.1851 (Ka = 0.0345, Ks = 0.1863)

Additional orthologs identified in other species via the OPTIC pipeline.

HDDC2 (Human)   Hddc2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 636 bp    Location:197971..215692   Strand:+
Raw sequence 
>bmy_13457
ATGGGAGGAGCTTCGGGGGGGAGGGGCTTCGGGGGGAGGAGCTTCGAGCAGCGGTTGCGCTGCCGGCCCAGACCTGTCGGGATCGGTAGCCGCATGGCTGCGCCCATCTCGGGCCGCGGGGCCCGGAACCTGCTTCAGTTCCTGCGGCTGGTGGGGCAGCTCAAGAGAGTCCCACGTACTGGCTGGGTATACAGAAATGTCCAGAAGCCAGAGAGCGTATCAGATCACATGTATAGGATGGCAATTATGGCTCTGGTGACCAAAGATGAACATCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGTTCATGATATGGCAGAATGCATCGAAGCTATGAAGCAGCTAACCCAGCTCCTCCCAGAGGATCTCAGAAAAGAGCTCTATGAACTTTGGGAAGAATATGAGACCCAATCTAGTGCAGAAGCTAAATTTGTGAAGCAGCTGGACCAATGTGAAATGATTCTTCAGGCATCTGAATATGAAGACCTTGAGAACAAACCTGGGAGATTGCAGGACTTCTTCAATTCCACAGCAGGAAAATTCAGTCACCCTGAGATAGCCCAGCTTGTTTCTGAACTTGAGGCAGAAAGAAACGCTAACATAGCTGCCGCCGCCAGTGAGCCACACTCGTGA

Related Sequences

bmy_13457T0 Protein

Length: 212 aa      View alignments
>bmy_13457T0
MGGASGGRGFGGRSFEQRLRCRPRPVGIGSRMAAPISGRGARNLLQFLRLVGQLKRVPRTGWVYRNVQKPESVSDHMYRMAIMALVTKDEHLNKDRCVRLALVHDMAECIEAMKQLTQLLPEDLRKELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFFNSTAGKFSHPEIAQLVSELEAERNANIAAAASEPHS*