Part of scaffold_865 (Scaffold)

For more information consult the page for scaffold_865 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMA4 ENSTTRG00000000702 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000662, Bottlenosed dolphin)

Protein Percentage 88.19%
cDNA percentage 88.75%
Ka/Ks Ratio 0.39795 (Ka = 0.0145, Ks = 0.0363)

PSMA4 ENSBTAG00000014440 (Cow)

Gene Details

Proteasome subunit alpha type-4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019203, Cow)

Protein Percentage 99.17%
cDNA percentage 97.08%
Ka/Ks Ratio 0.03978 (Ka = 0.0054, Ks = 0.1346)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 864 bp    Location:762004..768282   Strand:+
>bmy_13478
ATGATGACTCTGCACCGGCTCCTTGGTGATGGACCGGCCGCGGGACTGACTCCGGACGGCCGCCGAATTATCATAAAGTTCAGAAAACATGGAGTTGGCTTACTAAAAGTGGGTAGGAATCACTTGTATGTTTTTCCTTTGCAGTCTCGAAGATATGACTCCAGGACCACTATATTTTCTCCAGAAGGTCGCTTGTACCAAGTTGAATATGCCATGGAAGCTATAGGACACGCAGGCACCTGTTTGGGAATTTTAGCAAATGATGGTGTTCTGCTTGCAGCAGAGAGACGTAACATCCACAAGCTTCTTGATGAAGTCTTTTTTTCTGAAAAAATTTATAAACTGAATGAGGATATGGCCTGCAGTGTGGCAGGCATAACTTCTGATGCTAATGTTCTGACTAATGAACTGAGGCTCATTGCTCAAAGGTATTTATTGCAGTATCAGGAGCCAATTCCTTGTGAGCAGTTGGTCACAGCACTGTGTGATATCAAACAAGCTTATACACAGTTTGGAGGAAAACGTCCCTTTGGTGTTTCATTGCTTTACATTGGCTGGGATAAGCACTATGGCTTTCAGCTCTATCAGACTGTGTCGATGTTAAAACAAGATTACAAAGAAGGAGAAATGACTTTGAAGTCAGCTCTTGCTTTAGCTATCAAAGTCCTAAATAAGACCATGGATGTTAGTAAGCTCTCTGCTGAAAAAGTGGAAATTGCCACACTAACAAGAGAGAATGGAAAGACAGTCATCAGAGTTCTCAAACAAAAGGAAGTGGAACAGTTGATCAAAAAACATGAGGAAGAAGAAGCGAAAGCTGAGCGTGAGAAGAAAGAAAAAGAACAGAAAGAAAAGGATAAATAG

Related Sequences

bmy_13478T0 Protein

Length: 288 aa      View alignments
>bmy_13478T0
MMTLHRLLGDGPAAGLTPDGRRIIIKFRKHGVGLLKVGRNHLYVFPLQSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQTVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREKKEKEQKEKDK*